Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00099 ATGAGTTCGGGAGAATTAAGAGCCCTTGGGAAGAGGAATTTAGAATGGGATTTGAATGACTGGAAGTGGGATGGGGATCTTTTCATTGCTAGCTCTTTGAATTCAGTGCCATCTGCTACCCTAAGTCGGCAAATATTTCCAATTGGAACAATTCCAGAGACTGGAGGCTCGTCAAACAGCTCCTCGTCGTGCTCGGATGATGCTAATATGGGAATTGAGAAAGGGAAGAAAGAAATCGACAAAAGGAGGAGGATTACTGGGTTGGAAAATAGAGCCTTGCATGACGAAACTGGTGGGCTTATTTTAAAGCTCGGCTCTCATGGGTATCCGCTTCCTGAGAGGGAATTAGGGAGTTGGGAGGGTGGAAAGAAGACTAAATTGGTTGGAGGAAGTTCAAATCGTGCAATTTGCCAGGTGGAGGACTGTGGAGCTGATCTGAGCAAAGCTAAAGATTATCACAGGCGACATAAAGTCTGTGAGATGCATTCTAAAGCCAGTAGGGCGCTGGTGGGGAACCTCATGCAGCGTTTCTGTCAACAATGTAGCAGGTTTCATGTTCTTCAAGAGTTTGACGAAGGAAAAAGAAGTTGTCGTAGGCGTTTGGCAGGTCATAACAAGCGAAGAAGAAAAACAAATCCCGAGTCAGCTGCTAATGGAAGCTCCTCAAATGAAGATCAAACCAGTGGCTATCTACTCATTAGCCTGTTGAGACTACTTACTAACATGCATTCGAATCAATCAGACCAAACCACCGATCAGGATCTGATATCGCATCTTTTAAGGAGCATACCCAGTCAAAGTACTGAGCTCAAGGAGAAAGACATATCTGTACATTTGCAGAATCTGCAAAATGGCATATCAGTTAGTAATTCAGAACTAGCCTCTACTTTTCTTTCAAATGGTGCTCAGGATCCTTCAATGCCATCAAAACAGCATGCCACTTTGCCATTGTCTGAGATACCCTCACAAGGTGTGTTTGCTCATAATTCCAGAAGTGGAGATTCACGAGCTTATTCTGAATTCAACGAGTGCTCTGCAGGGAAAAGCAAGATGAATGACTTTGATTTGAACGACATATATGTTGACTCGGATGATGGAACTGAAGATGTAGAGAGATCTGTGCTTCCTGTACATTTAGGGGTGAGTTCCCTAGAGTCTCCTTGGGCTCAACAAGACTCTCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCAGATTCAGCATCTGCTCAGTCACCTTCTAGCTCTAGTGGAGAACCTCAGAGCCGCACAGATCGTATTGTCATTAAACTATTTGGAAAAGAGCCCAGTGATTTTCCTCTCAATCTACGAGCACAGGTGCTTGATTGGTTGGCACATAGTCCGACTGACATCGAGAGCTACATTAGACCTGGTTGTGTTGTTCTGACAATTTACCTACGTCAGACAGAAGATGCATGGGATGAACTTTGCTATGACCTAGGTTGTGGCTTGAGCAGGCTTCTGCAAGGCTCAGATGATGCTTTCTGGAGAACAGGATGGGTTTATGTTAGAATTCAGCATCATTTAGCATTTGTTTTACATGGTCAAGTCGTGGTGGACACATCCTTAGCGCTTCGCAATAACAATTATTGTAACATTGTCAGCGTAAAACCTATTGCCGTATCTGCATCGGAGAGGATACAGTTTTCAGTTAGAGGCTCGAACTTGAAGAGGCCGGGAACGAGGTTACTCTGTGCCATTGAAGGGAAGTATCTGACTGAGGAGGTTACTCAAGAATCAACTGATTCTGTTGATACATTAAAGGAGCATAATGAGATCCAATGCATTAGCTTTTCTTGCTCTATTCCTGTAGTGAATGGAAGGGGCTTCATTGAGGTTGAAGATCATGGATTCGGCAGTAGCTTTTTTCCATTTATAGTCGCGGAGGATGATGTATGTTCAGACATTCGTGCTCTTGAGAATGAACTGGAGTCGACTGATACGTGCTCAGACACTATGGGAGCTGCAGTAATGGGAACAAGGGTTCAAGCGTTAGATTTTATTCATGAAATGGGCTGGCTTCTTCATAGGGAACAACTGAAGTCTAGATTGAGCAATTTGAATCCAAATCCAGATCTTTACTCTTTGAATAGGTTTAAGTGGCTCATGGATTTCTCGATAGACCATGATTGGTGTGCTGTTGTGAGGAAATTATTAAACATTCTTCTTGATGGAAATGTGAATGTTGGAGATCACCTTTCGTTGAACGCTGCCTTATCTGAGATGGGTATTCTTCACCGGGCTGTAAGGAGAAACAGCAAGTCGCTTGTGGAGCTCCTTTTGAGATATAACCCCAAAAAAGTGAGATGTGAAGAAAATGTAGAGGCTGATGTAGGGGTTGAAGGCTTTTTGTTTAGGCCTGATGTTGCTGGACCTGGAGGCTTGACTCCGCTTCACATTGCAGCCGGTAAAGACGGTTCGGAAGATATCCTAGATGCATTAACCGATGATCCTGATACGGTCGGAATTGAAGCGTGGAAGAGCTCTCGAGACAGTACGGGATCCACACCCGAAGATTATGCTAACTTACGAGGCCATTTCTCGTACGGCCATCTTGTCCAGAAGAAAATCAATAAGAGGGTTACACCTGGCCATGTAGTTCTCGAAATTCCTAGTGTTCTCTCCGAATCTGTGACAAATCTTAAGCAATCCGACAGTTTGGGCAGTACCTTTGAGATCGGAACGGGCCAGCCAAGAACCCGTCTTAGGAACTGTGGGTACTGTGATAAGAAACTCACTCGCGGAAAATTGAGCAGATCTCTGGTTTACAGGCCAGCAATGTTGTCGATGGTAGCCATTGCCGCCGTTTGTGTGTGTGTGGCTCTTCTGTTCAAGAGCTTGCCGGAAGTTGTTGATTGTTTCCGGCCGTTCAGATGGGAATTGTTAGAATACGGAACGAGCTGA 2925 44.48 MSSGELRALGKRNLEWDLNDWKWDGDLFIASSLNSVPSATLSRQIFPIGTIPETGGSSNSSSSCSDDANMGIEKGKKEIDKRRRITGLENRALHDETGGLILKLGSHGYPLPERELGSWEGGKKTKLVGGSSNRAICQVEDCGADLSKAKDYHRRHKVCEMHSKASRALVGNLMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPESAANGSSSNEDQTSGYLLISLLRLLTNMHSNQSDQTTDQDLISHLLRSIPSQSTELKEKDISVHLQNLQNGISVSNSELASTFLSNGAQDPSMPSKQHATLPLSEIPSQGVFAHNSRSGDSRAYSEFNECSAGKSKMNDFDLNDIYVDSDDGTEDVERSVLPVHLGVSSLESPWAQQDSHQSSPPQTSGNSDSASAQSPSSSSGEPQSRTDRIVIKLFGKEPSDFPLNLRAQVLDWLAHSPTDIESYIRPGCVVLTIYLRQTEDAWDELCYDLGCGLSRLLQGSDDAFWRTGWVYVRIQHHLAFVLHGQVVVDTSLALRNNNYCNIVSVKPIAVSASERIQFSVRGSNLKRPGTRLLCAIEGKYLTEEVTQESTDSVDTLKEHNEIQCISFSCSIPVVNGRGFIEVEDHGFGSSFFPFIVAEDDVCSDIRALENELESTDTCSDTMGAAVMGTRVQALDFIHEMGWLLHREQLKSRLSNLNPNPDLYSLNRFKWLMDFSIDHDWCAVVRKLLNILLDGNVNVGDHLSLNAALSEMGILHRAVRRNSKSLVELLLRYNPKKVRCEENVEADVGVEGFLFRPDVAGPGGLTPLHIAAGKDGSEDILDALTDDPDTVGIEAWKSSRDSTGSTPEDYANLRGHFSYGHLVQKKINKRVTPGHVVLEIPSVLSESVTNLKQSDSLGSTFEIGTGQPRTRLRNCGYCDKKLTRGKLSRSLVYRPAMLSMVAIAAVCVCVALLFKSLPEVVDCFRPFRWELLEYGTS 974
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 998605 1003702 - BLOR01889 Blo10g00099 65295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00099 974 Pfam SBP domain 137 210 IPR004333 GO:0003677
Blo10g00099 974 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 7 973 IPR044817 GO:0003677
Blo10g00099 974 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 7 973 - -
Blo10g00099 974 MobiDBLite consensus disorder prediction 50 73 - -
Blo10g00099 974 MobiDBLite consensus disorder prediction 50 68 - -
Blo10g00099 974 Gene3D - 677 863 IPR036770 -
Blo10g00099 974 SUPERFAMILY Ankyrin repeat 697 855 IPR036770 -
Blo10g00099 974 SUPERFAMILY SBT domain 135 216 IPR036893 GO:0003677|GO:0005634
Blo10g00099 974 SMART ANK_2a 747 777 IPR002110 GO:0005515
Blo10g00099 974 SMART ANK_2a 800 830 IPR002110 GO:0005515
Blo10g00099 974 MobiDBLite consensus disorder prediction 385 422 - -
Blo10g00099 974 Gene3D - 128 198 IPR036893 GO:0003677|GO:0005634
Blo10g00099 974 MobiDBLite consensus disorder prediction 201 225 - -
Blo10g00099 974 ProSiteProfiles Zinc finger SBP-type profile. 134 211 IPR004333 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo07g00617 Blo10g00099 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00570 Blo-Chr2:10502934 Blo10g00099 Blo-Chr10:998605 3.93E-21 dispersed
Blo07g00126 Blo-Chr7:1727193 Blo10g00099 Blo-Chr10:998605 1.01E-146 dispersed
Blo07g00193 Blo-Chr7:2401303 Blo10g00099 Blo-Chr10:998605 2.26E-22 dispersed
Blo10g00099 Blo-Chr10:998605 Blo15g00202 Blo-Chr15:2094865 1.41E-32 dispersed
Blo01g00287 Blo-Chr1:3628133 Blo10g00099 Blo-Chr10:998605 1.07E-33 transposed
Blo07g00100 Blo-Chr7:1472225 Blo10g00099 Blo-Chr10:998605 2.20E-145 transposed
Blo17g00912 Blo-Chr17:29965441 Blo10g00099 Blo-Chr10:998605 1.20E-35 transposed
Blo10g00099 Blo-Chr10:998605 Blo07g00617 Blo-Chr7:19072362 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12801 PF03110 SBP 2.70E-29 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00099 - - qsu:112005479 1288.09