Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00133 ATGGATAGTACTACGAAGTCGCCGGAGGGTGGGGAAGATCGGACGCCGACCGGAGTTCAACCGATCAAGCCTTTACCCTTCAGCAATGGCCTTTTAAAGAGGCATAATCGTCATAATCATGATAATAATCATCACAACCTCAACTCCGCCGCTAACTCCGCCGTTGTTTCCTACAAAGAATGCCTGAAAAACCATGCGGCTAGCTTAGGAGCTCACGCTTTAGATGGGTGTGGAGAATTCATACCTTCTCCTTCTGCAACTCCTTCCGATCCCAGTTCTTTCAAATGCGCCGCTTGCGGATGTCACAGGAACTTCCACCGCCGCGAGCCCGACGAGGCGATTTTCCCGGCCCCAACAACACAATTAATCGAGTACCAGCCTCACCACCGCCACCAGCCGCCTCCTCCTCCTCAGCCGATCAGCCGGAGTCCAAGTTCGGCGTCGCCTCCCCCGATCTCGTCTTCGTACTACCCCTCAGCTCCCCACATGCTTCTGGCCCTCTCGTCTGCGTTATCGGCCCCTCCGGAGCCGGCTAATCCGTTCTCGAACGGTCGGAAACGATTCAGAACCAAATTCAGCCCCGATCAGAAAGAGAAAATGCATCAGTTTGCCGAAAGAGTTGGGTGGAGGATGCAGAAGAGAGACGAAGAACTGGTTCAAGAATTCTGCAATGAAATTGGCGTGGAAAAAGGGGTTCTGAAAGTATGGATGCACAACAACAAAAACTCATCTAGCAAGAAGGACGTTAATGGCGGAACGAATACTCTAGAACTCGCTGACAATGACAACAACTTCGTCGGTAATCTGAATCGCTACGATGACGATGAAAGAGTACATCCCGCCATTAACGGGTCTTCTTCTTCGTCCTGA 870 51.61 MDSTTKSPEGGEDRTPTGVQPIKPLPFSNGLLKRHNRHNHDNNHHNLNSAANSAVVSYKECLKNHAASLGAHALDGCGEFIPSPSATPSDPSSFKCAACGCHRNFHRREPDEAIFPAPTTQLIEYQPHHRHQPPPPPQPISRSPSSASPPPISSSYYPSAPHMLLALSSALSAPPEPANPFSNGRKRFRTKFSPDQKEKMHQFAERVGWRMQKRDEELVQEFCNEIGVEKGVLKVWMHNNKNSSSKKDVNGGTNTLELADNDNNFVGNLNRYDDDERVHPAINGSSSSS 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1513887 1514756 - BLOR01923 Blo10g00133 65329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00133 289 MobiDBLite consensus disorder prediction 244 289 - -
Blo10g00133 289 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 6 267 - -
Blo10g00133 289 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 58 109 IPR006456 -
Blo10g00133 289 MobiDBLite consensus disorder prediction 1 47 - -
Blo10g00133 289 MobiDBLite consensus disorder prediction 127 155 - -
Blo10g00133 289 MobiDBLite consensus disorder prediction 129 146 - -
Blo10g00133 289 SUPERFAMILY Homeodomain-like 175 246 IPR009057 -
Blo10g00133 289 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 6 267 - -
Blo10g00133 289 MobiDBLite consensus disorder prediction 173 198 - -
Blo10g00133 289 MobiDBLite consensus disorder prediction 244 268 - -
Blo10g00133 289 Pfam ZF-HD protein dimerisation region 56 110 IPR006456 -
Blo10g00133 289 Gene3D - 177 247 - -
Blo10g00133 289 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 58 109 IPR006456 -
Blo10g00133 289 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 185 242 IPR006455 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo10g00133 Blo11g00585 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00133 Blo-Chr10:1513887 Blo17g00363 Blo-Chr17:3880322 7.07E-95 dispersed
Blo10g00133 Blo-Chr10:1513887 Blo11g00585 Blo-Chr11:5715242 1.64E-118 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12805 PF04770 ZF-HD_dimer 6.00E-28 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00133 - - qsu:112022185 275.404