Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00164 TTTCTTCTGTTTGGTCTGCTTGCAGAAGCTTACGATGCACTTGATCCAACTGGAAACATCACCATCAAATGGGACATTATTGCTTGGACTGCTGATGGCTACGTGGCTACCGTGACGATATACAACTTTCAGCAATATCGGCACATTCAAGCACCGGGATGGTCGCTAGGATGGACATGGGCGAAGAAGGAGATAATCTGGAGCATGTTGGGAGGTCAAGCGACGGAGCAAGGAGATTGCTCAAGATTTAAGGGAAATATTCCTCACTGCTGCAAAAAGAATCCGACCGTCGTTGATCTTCTGCCCGGAACTCCTTACAACCAACAAGTCGCGAATTGCTGTAGAGGTGGAGTACTTGCCTCGTGGGTTCAAGACCCAGCCAACTCGGCTAGCTCGTTTCAGATCAGTGTCGGTTCTTCAGGAACCACCAATAAGACAGTGAGAGTGCCGAAGAACTTCACTTTACGCGCACCGGGGCCTGGATATACTTGTGGACCTGGAAAGATAGTTAAACCGAGTAAATTTATGACCACGGATAAAAGAAGAGTCACACAAGCATTGATGACATGGAACGTTACATGCACATTTTCACAATTTCTGGCCGAGAGAACTCCTACTTGTTGTGTTTCGCTGTCGTCTTTCTACAATCGCACGATTGTCTCCTGCCCGACTTGCTCCTGTGGTTGCCAAAGCAATATGAGTCGGTCTGGTGGCTGTTTTACGGAAAAATCGTCACATTTGGCATCGATTGTTTCAAATCCCGGCACGAAAAATGCGCCTATGATTCAATGCACGGGCCATATGTGTCCGATTAGAGTTCATTGGCATGTCAAGCTCAACTATAAAGAATATTGGCGGGTGAAGATTACCGTCACTAATTTCAATTACGCGATGAACTATTCCAACTGGAACTTAGTTCTTCAGCATCCAAATTTTGACAATCTGACTCAGATTTTCAGTTTCAACTACGAGTCTCTAAATCCTTATACGGCGATAAATGATACTGGGATGCTGTGGGGAATCAAGTTTTACAATGATCTTCTCGTGGAAGCAGGGCCCTCTGGAAATGTTCAGTCTGAACTACTCTTTCGGAAGGAAAAATCGACCTTCACTTTCGAAAAGGGTTGGGCATTTCCTCGAAGGGTTTACTTTAATGGCGATAACTGCGTTATGCCACCACCCGATGCTTATCCATGGCTGCCGAATGCGGGTTCTGGCCTTGATATTTCCTTTTTTGCTCTTCTTTTG 1248 45.67 FLLFGLLAEAYDALDPTGNITIKWDIIAWTADGYVATVTIYNFQQYRHIQAPGWSLGWTWAKKEIIWSMLGGQATEQGDCSRFKGNIPHCCKKNPTVVDLLPGTPYNQQVANCCRGGVLASWVQDPANSASSFQISVGSSGTTNKTVRVPKNFTLRAPGPGYTCGPGKIVKPSKFMTTDKRRVTQALMTWNVTCTFSQFLAERTPTCCVSLSSFYNRTIVSCPTCSCGCQSNMSRSGGCFTEKSSHLASIVSNPGTKNAPMIQCTGHMCPIRVHWHVKLNYKEYWRVKITVTNFNYAMNYSNWNLVLQHPNFDNLTQIFSFNYESLNPYTAINDTGMLWGIKFYNDLLVEAGPSGNVQSELLFRKEKSTFTFEKGWAFPRRVYFNGDNCVMPPPDAYPWLPNAGSGLDISFFALLL 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1961135 1962984 - BLOR01954 Blo10g00164 65360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00164 416 PIRSF COBRA 2 416 IPR006918 GO:0010215|GO:0031225
Blo10g00164 416 PANTHER COBRA-LIKE PROTEIN 8 416 - -
Blo10g00164 416 Pfam COBRA-like protein 34 197 IPR006918 GO:0010215|GO:0031225
Blo10g00164 416 PANTHER PROTEIN COBRA 8 416 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00164 Blo-Chr10:1961135 Blo13g00525 Blo-Chr13:26825643 2.08E-116 dispersed
Blo10g00164 Blo-Chr10:1961135 Blo10g00166 Blo-Chr10:1974172 0 proximal
Blo10g00164 Blo-Chr10:1961135 Blo11g00321 Blo-Chr11:2614081 0 wgd
Blo10g00164 Blo-Chr10:1961135 Blo15g00345 Blo-Chr15:4346480 7.12E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00164 - - qsu:112009790 751.51