Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00165 ATGCCCGTCTTCTTCGTATGCAGAAGAGAAAAATGGAACCAAAGCAACCTGAGGACAAGCTTTTCGCTCGCATGGCATCGATTGAAGCAAACAAGAGGACTTCACGAGCACGCTTTTGATTTGCTTGATAAGACTAAATTTTATGTCGTTGGAGCTGGTCTCTTTACAGGGGTTACTGTAGGCCTTTATCCGGTCTCTCTGGTAAAAACAAGGCTGCAAGTTGCTTCAAAGGAAGCCGTGGATAGAAAAGCATTTTCTGTTTTAAAGGGGATACTAAAAACTGATGGAGTTCTTGGTCTTTACAGAGGGTTTGGTACGGTGATCATTGGTGCAATTCCAACAAGGATCCTTTTCTTAACTGCTTTAGAGACAACCAAAGTAGGCGCCTTTAAATTTGTTGAGCCACTTAAGTTATCTGAACCAACGAAGGCAGCTATAGCAAATGGATTAGCCGGCATGTCAGCATCTCTTTGTTCTCAGGCTGTGTTTGTTCCCATTGATGTGATTAGTCAGAAATTGATGGTGCAAGGATACTCTGGGAATGCCAAGTATAGTGGGGGTTTGGATGTTGCCCGAAAGCTTATAAAATCAAATGGGATGAGGGGATTATATAAGGGGTTTGGTTTATCTGTCCTCACTTACTCACCATCTAGTGCTGTATGGTGGGCAAGTTATGGCTCAAGTCAACGCATCATCTGGAGGCTTCTGAGTCAAGGTACTAATCCTGAAGAATCTGTTCCTGGCGAGGCAAAATTAATGTTTGTTCAAGCTAGTGGAGGGATAATAGCAGGCGCAACAGCTTCCTGCATCACCACACCACTGGACACCATTAAAACTCGCCTACAGGCCTCCAATAAGCCTTACCCACATAAGGAGGCCAAGAAGGAAGGGGGAGACCAGGGGAAGAAGAAGGATTCTGTGAGGAAGAGAAGAGGGTTGGAAGGGTGTTTGTCGTGA 957 44.83 MPVFFVCRREKWNQSNLRTSFSLAWHRLKQTRGLHEHAFDLLDKTKFYVVGAGLFTGVTVGLYPVSLVKTRLQVASKEAVDRKAFSVLKGILKTDGVLGLYRGFGTVIIGAIPTRILFLTALETTKVGAFKFVEPLKLSEPTKAAIANGLAGMSASLCSQAVFVPIDVISQKLMVQGYSGNAKYSGGLDVARKLIKSNGMRGLYKGFGLSVLTYSPSSAVWWASYGSSQRIIWRLLSQGTNPEESVPGEAKLMFVQASGGIIAGATASCITTPLDTIKTRLQASNKPYPHKEAKKEGGDQGKKKDSVRKRRGLEGCLS 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1963561 1968716 + BLOR01955 Blo10g00165 65361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00165 318 MobiDBLite consensus disorder prediction 285 312 - -
Blo10g00165 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 251 318 IPR018108 -
Blo10g00165 318 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 36 283 - -
Blo10g00165 318 Gene3D Mitochondrial carrier domain 48 309 IPR023395 -
Blo10g00165 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 143 231 IPR018108 -
Blo10g00165 318 MobiDBLite consensus disorder prediction 281 318 - -
Blo10g00165 318 PRINTS Mitochondrial carrier protein signature 57 75 IPR002067 GO:0055085
Blo10g00165 318 PRINTS Mitochondrial carrier protein signature 101 119 IPR002067 GO:0055085
Blo10g00165 318 PRINTS Mitochondrial carrier protein signature 152 174 IPR002067 GO:0055085
Blo10g00165 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 44 128 IPR018108 -
Blo10g00165 318 SUPERFAMILY Mitochondrial carrier 42 288 IPR023395 -
Blo10g00165 318 Pfam Mitochondrial carrier protein 254 293 IPR018108 -
Blo10g00165 318 Pfam Mitochondrial carrier protein 145 232 IPR018108 -
Blo10g00165 318 Pfam Mitochondrial carrier protein 54 127 IPR018108 -
Blo10g00165 318 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 36 283 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00051 Blo-Chr5:423977 Blo10g00165 Blo-Chr10:1963561 3.55E-62 dispersed
Blo10g00165 Blo-Chr10:1963561 Blo13g01027 Blo-Chr13:32612166 3.59E-06 dispersed
Blo10g00165 Blo-Chr10:1963561 Blo06g00744 Blo-Chr6:30642411 1.55E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00165 K15121 - cit:102614745 393.275