Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00166 ATGAGCCCGGGGTGGACACTCGGGTGGACGTGGGCAAAGAAAGAGGTCATATGGTCCATGGCCGGGGCTCAAGCCACGGAGCAAGGTGACTGCTCAAAGTTCAAAGGGAACATCCCCCATTGCTGCAAGAAGAGCCCCACAGTTGTGGACTTGCTGCCAGGAGTCCCTTACAATCAACAATTCACCAATTGCTGCAAAGGTGGAGTTGTGGCTGCTTGGGGTCAAGACCCCCAGGCTTCCGTCTCGGCCTTCCAGATAAGCGTCGGCCTTTCCGGCTCCTCGAATAAGACCGTCAAGCTCCCGAAGAACTTCACCCTGTTAGGCCCCGGTCCCGGCTACACGTGCGGGCCTGCTAAGATCGTCCCTTCCACGACCTTTCTCACCCCGGATCGTCGTCGGAAAACTCAAGCTTTGATGACATGGAACGTAACGTGCACTTATTCGCAATTTCTCGCCAGGAAAAACCCGAATTGCTGTGTTTCTTTCTCGTCTTTCTACAACGAAACTATCACCCCTTGCCCATCTTGTGCATGCGGCTGCCCAAACAAAAATAATTGTGTCAAGAGCGATGCCAAGATTCTTACGATGGTGGGAATAAATACGACGAAGAAAGACAACTCCCCTCTTCTCCAATGCACGCACCATATGTGTCCCGTTCGAGTTCATTGGCACGTCAAGCAAAACTACAAAGACTATTGGCGGGCAAAGCTCGCCATCACCAACTTCAACTATCGAAAGAACTACACGCTCTGGTCTCTCGTCGTTCAGCACCCGAATCTCAACAAAGTAACCCAAGTTTTCAGCTTTGATTACAAGTCACTCGTTCCCTACGAGTCGATAAATGACACTGGAATGTTTTATGGCATGAAATACTATAATGACCTGTTAATGGAGGCTGGACCATTTGGGAATCTTCAGTCTGAGGTGCTTCTTCAAAAGGACAAGAACACTTTCACCTTCAAGCAGGGATGGGCATTTCCTCGGAAAGTTTACTTCAACGGCGACGAATGTATGCTGCCACCACCCGACCAATACCCGTTTCTACCCAATTCTGCAGGCCAAAATCTGATCGCCTACTTCTTTTCGATCGTTTCGATGCTCTTCTTGTTCATGGCAATCTACTGA 1125 49.78 MSPGWTLGWTWAKKEVIWSMAGAQATEQGDCSKFKGNIPHCCKKSPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPQASVSAFQISVGLSGSSNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTTFLTPDRRRKTQALMTWNVTCTYSQFLARKNPNCCVSFSSFYNETITPCPSCACGCPNKNNCVKSDAKILTMVGINTTKKDNSPLLQCTHHMCPVRVHWHVKQNYKDYWRAKLAITNFNYRKNYTLWSLVVQHPNLNKVTQVFSFDYKSLVPYESINDTGMFYGMKYYNDLLMEAGPFGNLQSEVLLQKDKNTFTFKQGWAFPRKVYFNGDECMLPPPDQYPFLPNSAGQNLIAYFFSIVSMLFLFMAIY 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1974172 1975595 - BLOR01956 Blo10g00166 65362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00166 374 PANTHER PROTEIN COBRA 1 370 IPR006918 GO:0010215|GO:0031225
Blo10g00166 374 PIRSF COBRA 1 374 IPR006918 GO:0010215|GO:0031225
Blo10g00166 374 Pfam COBRA-like protein 2 148 IPR006918 GO:0010215|GO:0031225
Blo10g00166 374 PANTHER COBRA-LIKE PROTEIN 1 370 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g01207 Blo-Chr6:35642734 Blo10g00166 Blo-Chr10:1974172 0 dispersed
Blo10g00166 Blo-Chr10:1974172 Blo15g00345 Blo-Chr15:4346480 8.26E-65 dispersed
Blo10g00164 Blo-Chr10:1961135 Blo10g00166 Blo-Chr10:1974172 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00166 - - qsu:112004749 730.709