Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00220 ATGAGATACCCTCTACGTTTCACCATTGGAAGGGACAAGTCACACGCCAACTTGCCCCTTGTTTTGAGCTGCTCTGAGCTTGGAGTTAGCCTTTTAGCCAAAGCTAGGCTCCCCCAGAGTGGGAGCTGGGCTTCTGGGCATCGCAATTGGCTGGGGCTTTGTAGTGGGTTCAAGATGCCGGAAATGTCGATCCCGAAAGAGGCGGCTTACCAGATAATCAACGACGAGCTGATGTTGGACGGAAACCCACGGCTGAACTTGGCCTCGTTCGTCACCACTTGGATGGAGCCGGAATGCGATAAGCTCATTATGGACTCCATTAACAAGAACTACGTAGACATGGATGAGTACCCTGTCACTACCGAGCTTCAGAACCGGTGTGTGAACATGATAGCTCATCTGTTCAATGCCCCACTCGGGGAATCCGAGGCGGCTGTCGGAGTCGGAACAGTGGGGTCGTCGGAGGCCATTATGTTGGCCGGCTTAGCATTCAAGAGGACGTGGCAGAATAAGCGAAAGGCTGAGGGCAAACCCTACGACAAACCAAATATTGTCACCGGAGCTAATGTTCAGGTATGCTGGGAGAAATTTGCAAGATACTTTGAAGTGGAGCTGAAGGAGGTGAAGTTGAGAGAAGGATACTACGTTATGGATCCTGAAAAAGCTGTAGAAATGGTGGATGAAAACACTATCTGTGTTGCTGCTATTTTGGGCTCTACCCTCAATGGTGAATTTGAGGATGTCAAGCTATTGAATGATCTCTTGATGAAGAAGAACAGCCAAACTGGATGGGACACCCCCATTCACGTTGACGCCGCAAGTGGAGGGTTCATAGCGCCATTTCTGTACCCAGAGCTGGAGTGGGACTTTCGTTTGGAACAGGTGAAGAGCATCAACGTCAGCGGCCACAAATATGGGCTGGTCTACGCTGGGATTGGGTGGGTGATTTGGAGAAGCAAGCAGGATTTGCCTGAAGAACTCATCTTCCATATCAACTATCTCGGCGCCGATCAACCCACCTTCACCCTCAATTTCTCCAAAGGTTCTAGTCAAGTCATTGCTCAGTACTATCAACTCATTCGCCTCGGCCATGAGGGATATAGAAATGTGATGGAAAATTGCCGCGACAACATGATCGTGCTCAAACAAGGATTAGAAAAAACCGGGCGATTCAACATAGTCTCCAAGGACGAAGGAGTCCCCCTCGTTGCCTTCTCCTTGAAAGACAACGTTCAACACAATGAGTTCGAAGTTTCTGAGATGTTGAGGCGCTTCGGATGGATCGTTCCAGCCTACACGATGCCTCCAAATGCAGAACACATCACTGTCCTCCGAGTCGTCATTCGAGAAGACTTCTCGCGCACACTGGCAGAGCGGCTCGTGTTTGACATCGAGAAAGTGTTGCACGAGCTCGACACCCTACCGGCCAGGGTTACTGCCAAGTTAGCCATTTCCGGAGAAGAGATGGTTCAATGTAATGGCACTTTAGTGCGCAAGAAAAGTGCTCTTGAGTTGCAGAGGGAGATCACTACAACTTGGAAGAAGTTTGTTCTTGAGAGCAGACTCTCACCTGTTCTATTGCTCCCTTGGCCTGCGCCTGGTGGTCAGATGCAGCTCACAGCAGCTGATGTGGCGATCCTTTCAGCTAAAATTGGAGTCTCGGTGGAGGATTTAGCGGCACTACCTTCCCTAGATGTCACGCATGAGAAGCGAAGTAAGCGGATGGCTTTAAAAAATTGGGGAATCTCTTCAATTCCATGCTTTTCCGGAGTTGATGGGTCCAAGCTGATCGTACCTATAGATATATTTGGATATGTGGTGATATGGTTCATAACAAATGAAATGCAACACTTGGAATGA 1860 49.14 MRYPLRFTIGRDKSHANLPLVLSCSELGVSLLAKARLPQSGSWASGHRNWLGLCSGFKMPEMSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAVGVGTVGSSEAIMLAGLAFKRTWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLMKKNSQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLEQVKSINVSGHKYGLVYAGIGWVIWRSKQDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRDNMIVLKQGLEKTGRFNIVSKDEGVPLVAFSLKDNVQHNEFEVSEMLRRFGWIVPAYTMPPNAEHITVLRVVIREDFSRTLAERLVFDIEKVLHELDTLPARVTAKLAISGEEMVQCNGTLVRKKSALELQREITTTWKKFVLESRLSPVLLLPWPAPGGQMQLTAADVAILSAKIGVSVEDLAALPSLDVTHEKRSKRMALKNWGISSIPCFSGVDGSKLIVPIDIFGYVVIWFITNEMQHLE 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2824461 2829416 - BLOR02010 Blo10g00220 65416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00220 619 Gene3D - 93 387 IPR015421 GO:0003824
Blo10g00220 619 Gene3D - 388 475 - -
Blo10g00220 619 PANTHER GLUTAMATE DECARBOXYLASE 56 521 IPR010107 GO:0004351|GO:0006536|GO:0030170
Blo10g00220 619 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 56 471 IPR010107 GO:0004351|GO:0006536|GO:0030170
Blo10g00220 619 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Blo10g00220 619 Pfam Pyridoxal-dependent decarboxylase conserved domain 60 408 IPR002129 GO:0016830|GO:0019752|GO:0030170
Blo10g00220 619 SUPERFAMILY PLP-dependent transferases 51 471 IPR015424 -
Blo10g00220 619 Gene3D - 52 92 - -
Blo10g00220 619 PANTHER GLUTAMATE DECARBOXYLASE 56 521 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00220 Blo-Chr10:2824461 Blo15g00034 Blo-Chr15:266765 0 dispersed
Blo01g00168 Blo-Chr1:2345922 Blo10g00220 Blo-Chr10:2824461 1.12E-18 transposed
Blo10g00220 Blo-Chr10:2824461 Blo11g00381 Blo-Chr11:3260639 2.83E-25 wgd
Blo10g00220 Blo-Chr10:2824461 Blo18g00485 Blo-Chr18:5852115 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00220 K01580 - zju:107415793 850.121