Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00222 ATGGCACTCTTTCTGCTTCGTCTTTACTTCCTCGTCACTCTTGCTGCATCCATCGCATCAATGGCGGAATCCCATTACTCCTCCTCGTATCCTCAGCAGGAATCTTCTTCCTCATCCTCACTCGCCGACTGGAGATCCGCCCGTGCCACTTTCTACGCCGCCTACGACCCTCGTGACGCTGTCGGTGGTGCCTGCGGCTACGGCGATCTGGTGAAGGCCGGGTACGGTATGGCCACGGTGGGGCTGAGTGAGACGCTGTTTGAGCGAGGTCAGATCTGCGGCGCCTGCTTCCAGCTGAGGTGTGTCGAGGATCTACGGTGGTGTATTCCCGGAAATTCGATCATTGTCACAGCGACGAACTTTTGTGCCCCTAATTACGGGTTCCCGGCGGAGGGAGGTGGCCATTGTAACCCTCCTAATAATCATTTTGTGCTTCCCATTGAGGCGTTCGAGAAGATCGCTATCTGGAAAGCCGGGAATATGCCTGTCCAATATCGCAGAATCAAGTGCAGAAAGGAAGGTGGAATTCGATTGTCGATAGATGGGGCAGGCATCTTCATTTCCGTGCTGATAAGCAATGTCGGTGGGGCCGGGGACGTACTTGCAGTGAAGATCAAAGGGTCAAGAACCGGTTGGCTTCCAATGGGAAGAAATTGGGGACAAAACTGGCATATTAACGCGGATTTGAAGAACCAACCCCTGTCGTTTGAGATAACAAACAGTGATGGTATTACTATAACATCTTACAACGTTGCTCCCAAGGATTGGAACTTTGGACAAACCTTTGAAGGCAAGCAATTCGACTCT 807 51.92 MALFLLRLYFLVTLAASIASMAESHYSSSYPQQESSSSSSLADWRSARATFYAAYDPRDAVGGACGYGDLVKAGYGMATVGLSETLFERGQICGACFQLRCVEDLRWCIPGNSIIVTATNFCAPNYGFPAEGGGHCNPPNNHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRLSIDGAGIFISVLISNVGGAGDVLAVKIKGSRTGWLPMGRNWGQNWHINADLKNQPLSFEITNSDGITITSYNVAPKDWNFGQTFEGKQFDS 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2866533 2868488 + BLOR02012 Blo10g00222 65418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00222 269 Pfam Expansin C-terminal domain 176 253 IPR007117 -
Blo10g00222 269 Gene3D - 176 267 IPR036749 -
Blo10g00222 269 SMART dpbb_1 79 165 IPR007112 -
Blo10g00222 269 PRINTS Expansin signature 174 186 IPR002963 GO:0009664
Blo10g00222 269 PRINTS Expansin signature 150 163 IPR002963 GO:0009664
Blo10g00222 269 PRINTS Expansin signature 250 266 IPR002963 GO:0009664
Blo10g00222 269 PRINTS Expansin signature 133 150 IPR002963 GO:0009664
Blo10g00222 269 PRINTS Expansin signature 114 124 IPR002963 GO:0009664
Blo10g00222 269 PRINTS Expansin signature 186 207 IPR002963 GO:0009664
Blo10g00222 269 PRINTS Expansin signature 221 242 IPR002963 GO:0009664
Blo10g00222 269 PRINTS Expansin signature 74 88 IPR002963 GO:0009664
Blo10g00222 269 PRINTS Expansin signature 101 112 IPR002963 GO:0009664
Blo10g00222 269 Pfam Lytic transglycolase 80 165 IPR009009 -
Blo10g00222 269 SUPERFAMILY PHL pollen allergen 172 264 IPR036749 -
Blo10g00222 269 PRINTS Expansin/Lol pI family signature 43 58 IPR007118 GO:0005576
Blo10g00222 269 PRINTS Expansin/Lol pI family signature 212 226 IPR007118 GO:0005576
Blo10g00222 269 PRINTS Expansin/Lol pI family signature 250 264 IPR007118 GO:0005576
Blo10g00222 269 PRINTS Expansin/Lol pI family signature 61 79 IPR007118 GO:0005576
Blo10g00222 269 PRINTS Expansin/Lol pI family signature 158 174 IPR007118 GO:0005576
Blo10g00222 269 PRINTS Expansin/Lol pI family signature 83 101 IPR007118 GO:0005576
Blo10g00222 269 Gene3D - 27 171 IPR036908 -
Blo10g00222 269 PANTHER EXPANSIN-A13 23 268 - -
Blo10g00222 269 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 62 175 IPR007112 -
Blo10g00222 269 SUPERFAMILY Barwin-like endoglucanases 43 193 IPR036908 -
Blo10g00222 269 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 185 264 IPR007117 -
Blo10g00222 269 PANTHER EXPANSIN-A15 23 268 IPR002963 GO:0009664
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00222 Blo-Chr10:2866533 Blo16g01112 Blo-Chr16:39592483 7.53E-93 dispersed
Blo10g00222 Blo-Chr10:2866533 Blo13g00832 Blo-Chr13:31013777 5.48E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00222 - - csv:101206236 456.062