Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00229 ATGGCTTCAATCCCTCAGGTCGCCTTTCTCCTCGCCGTCTCCCTCTGCATCATCTCCATTTCTGAAGCTCGTCCCTGCAAAACCTTTGTCATATCCTCATATTCCTTCTCCGTTTTCCGCCATCAAAACCCTAATTCCCCTCATCTTCTTCGCCCTTCTGGATTCGTCACAGTTATTGCTGAATTCAGTCAACCCGATCGATCCTCTTTCGGGTCCTCTGAAGTTGTTGGCAAACCTCGTTGGTTTCCTTCTTCCGACGGAGGCGATGAGGTCGAGTCGGAGATTGCGGACGAGAGGCCTCCTTTCCGTCTCCGCCCTCACAAACCGCCATTCGGAGCTGGTTTTCAGCCGGAATTTTCTTACGATTTCACTTCTCTGCGTGATCGCACCAAAGATATAATGAGTGTTGTTGTCGCTTTGCTATTTGGAGTCGGCTGCGGTGCTCTTACTGCTGCCACTATGTATTTGGCCTATTCTCTTTTCTCTACCCGCTTCCAGAATCGGTCTTCTCTTTACGAAGACTATAGTGATAGTGATGAGGACGATGGTAACTATAGCGCTGATGATTCTGATCTGAAGAAGATGGGTTATGTTAAGATTCCGGCTGATTCAACCCCTGCTCCTGTTAAGGCCGTGGTTTGGTTTGATTACGAGATGAATAGATGGGCAATGCGGTGGTTTGAGCTTGGAGGAGAAAAGAAGTGCTTAAATTCAGAGCTTTGGCATGCGTGCGCAGGGCCCCTGGTGTCGCTCCCGACAGCTGGGACTCGTGTCGTCTACTTTCCTCAGGGTCACAGTGAGCAGGCAGATGTGGAAACTGATGAAGTATATGCGCAAATGACATTACAGCCATTGACACCCCAAGAGCAAAAGGATAGATTTCTTCCTATGGAGTTGGGGATCCCAAGCAAACAGCCCACTAACTATTTTTGCAAGACATTGACTGCAAGCGACACAAGCACTCACGGAGGTTTCTCTGTTCCTCGACGTGCTGCAGAAAAAGTTTTTCCTCCTCTGGATTTTTCGCTACAGCCACCAGCACAAGAACTTATTGCAAGAGATTTGCATGATGTTGAGTGGAAATTCAGGCATATTTTTCGAGGACAGCCAAAGCGTCATCTTCTTACAACAGGATGGAGTGTGTTTGTTAGTGCAAAAAGACTTGTTGCTGGAGATTCAGTTCTTTTTATATGGAATGAAAAAAATCAGCTGCTCTTGGGCATTCGTCATGCTATACGACCTCAAACTGTGATGCCATCGTCTGTTCTATCAAGTGACAGTATGCATATTGGACTTCTTGCAGCTGCAGCTCATGCCGCTGCAACAAATAGTTGTTTCACAGTTTTTTATAACCCCAGGGCTAGCCCATCGGAGTTTTTCATCCCTCTGTCAAAATATGTTAAAGCTGTGTTTCATACACGCATTTCGGTGGGGATGCGATTTCGGATGCTTTTTGAGACAGAAGAGTCAAGTGTTCGAAGGTACATGGGTACAATTACAGGAATAAGTGATCTGGATCATGTTCGTTGGCCTAATTCCCATTGGCGTTCTGTCAAGGTGGGTTGGGATGAATCAACTGCTGGTGACAGGCAACCAAGAGTATCTTTGTGGGAGATTGAGCCATTGACAACGTTTCCCATGTACCCTTCTCTTTTTCCACTCAGACTAAAACGTCCATGGCATCCTGGGGCCTCGTCATTGCATGTTAAGAGAGTTGAAACTAAGATGCCTTCCTCTGACATGAAGCAGCCAAATATAACCCGAATCCAATGCAATTTTGGAGATGTGTGCTCAAGAGATGATGCGGCTAACGGGTTAATGTGGCTGAGAGGGGGAACAGGGGAACAAGGTCTACAATCTCTCAATTTTCAATCTGTTGGTGTGCTTCCCTGGTTGCAACAGAGACTTGATTCATCATTGCTTGGATCAGATCATAATCAACAGTACCACACCATGGTGGCAGCTGGTATACAGAACCTTGGAAGTGGAGATCTTCTAAGACAGCAAATGATGCACCTTCAACAGCCTTTCCAATATCTTCAGCAGCCTAGTAGTCATCCTGCGCATCTGCAAATGACGCAGCAGTCCCAGCAGCAGATGGTTCAACAATCCCTGCTTCCGAATGCCCTTCATCCTCAATACCAACCATTGGTAGAGAACTTACCCCAGCACATCTTGCAGCAAACAATAAATAATCAATCCGAGCAGCAGCCAAATCAGCAATCACTCTCTTATCATCGGGCTCTTCGGGTTCAAAGCACCCAGCTTCATCAAGATCAGCATCCAAATGTGCCTTCGCCCACCTTTCCTGGAACAGACTTAATGGATTCAAGCACCAAGTTCTCTGCTTCCATGTCCCCTAGGCAAAATATACTTGGTTCATCATCCCCTGATACTGGGGGCGGTTTCTCACACTTTTATCGAGGTCAGTCAGCGCTATCAGAGCACTCATCCCATCAAACCACTTCTAAATATGGTCATTCTCACGTCACAGCTCATACTAATTTTCCTTTGTTTCCTGGGAGAGACTCTATTGGGGAGCTGGGAAATTGTAACTCAGAGCCTCCCAATCCCATTGTTTTTGGTGTGAATATTGATTCCTCTGGGCTTCTACTTCCCACTGTGCAAAATTTTGCCTCTCCTTCTGTTGATGCTGATTCATCCACCATGCCAATAGGGGATTCTGGATTTCAAAATTCTCTATATGGTTGTGTTCAGGACTCGTCTGAGCTATTACGTAGTTCGGAGCAAGTTGATCCAACAACCCCCACTCAGACATTTGTTAAGGTTTACAAGTCGGGATCGGTTGGGCGCTCTCTTGATATCTCCCGGTTTAACAGCTACCATGAGTTGCGGGAAGAGTTGGCTCAGATGTTTGGCATCGAGGGAAAGTTGGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTCGACAGGGAGAATGATGTTCTTCTCCTTGGAGATGACCCATGGGAGGCATTTGTCAACAACGTTTGGTATATCAAAATACTTTCACTTGAAGATTTTCAAAAAATGGGGGAGCATGCGATTGAATCATTCGGCCCCAGTATAGGTCAGCGGCCGAATAGCAGCAGTGGTGAAGCTCACTCTGGCTTCCCATCTCTCGGCCCCCAGGAGTACTGA 3147 46.71 MASIPQVAFLLAVSLCIISISEARPCKTFVISSYSFSVFRHQNPNSPHLLRPSGFVTVIAEFSQPDRSSFGSSEVVGKPRWFPSSDGGDEVESEIADERPPFRLRPHKPPFGAGFQPEFSYDFTSLRDRTKDIMSVVVALLFGVGCGALTAATMYLAYSLFSTRFQNRSSLYEDYSDSDEDDGNYSADDSDLKKMGYVKIPADSTPAPVKAVVWFDYEMNRWAMRWFELGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQADVETDEVYAQMTLQPLTPQEQKDRFLPMELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHAIRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFFIPLSKYVKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDHVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGASSLHVKRVETKMPSSDMKQPNITRIQCNFGDVCSRDDAANGLMWLRGGTGEQGLQSLNFQSVGVLPWLQQRLDSSLLGSDHNQQYHTMVAAGIQNLGSGDLLRQQMMHLQQPFQYLQQPSSHPAHLQMTQQSQQQMVQQSLLPNALHPQYQPLVENLPQHILQQTINNQSEQQPNQQSLSYHRALRVQSTQLHQDQHPNVPSPTFPGTDLMDSSTKFSASMSPRQNILGSSSPDTGGGFSHFYRGQSALSEHSSHQTTSKYGHSHVTAHTNFPLFPGRDSIGELGNCNSEPPNPIVFGVNIDSSGLLLPTVQNFASPSVDADSSTMPIGDSGFQNSLYGCVQDSSELLRSSEQVDPTTPTQTFVKVYKSGSVGRSLDISRFNSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVNNVWYIKILSLEDFQKMGEHAIESFGPSIGQRPNSSSGEAHSGFPSLGPQEY 1048
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3069226 3090095 + BLOR02019 Blo10g00229 65425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00229 1048 MobiDBLite consensus disorder prediction 754 801 - -
Blo10g00229 1048 Gene3D - 308 412 IPR015300 -
Blo10g00229 1048 CDD B3_DNA 309 402 IPR003340 GO:0003677
Blo10g00229 1048 ProSiteProfiles B3 DNA-binding domain profile. 310 412 IPR003340 GO:0003677
Blo10g00229 1048 PANTHER AUXIN RESPONSE FACTOR 8 224 268 - -
Blo10g00229 1048 PANTHER AUXIN RESPONSE FACTOR 8 269 1026 - -
Blo10g00229 1048 SMART B3_2 310 412 IPR003340 GO:0003677
Blo10g00229 1048 MobiDBLite consensus disorder prediction 1024 1039 - -
Blo10g00229 1048 MobiDBLite consensus disorder prediction 1021 1048 - -
Blo10g00229 1048 Pfam Auxin response factor 436 519 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Blo10g00229 1048 MobiDBLite consensus disorder prediction 754 807 - -
Blo10g00229 1048 ProSiteProfiles PB1 domain profile. 925 1009 IPR000270 GO:0005515
Blo10g00229 1048 Gene3D - 921 1014 - -
Blo10g00229 1048 SUPERFAMILY CAD & PB1 domains 918 999 - -
Blo10g00229 1048 Gene3D - 474 546 - -
Blo10g00229 1048 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 224 268 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo10g00229 1048 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 269 1026 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo10g00229 1048 SUPERFAMILY DNA-binding pseudobarrel domain 295 439 IPR015300 -
Blo10g00229 1048 Pfam AUX/IAA family 921 1007 IPR033389 -
Blo10g00229 1048 Pfam B3 DNA binding domain 310 410 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo08g00564 Blo-Chr8:18894680 Blo10g00229 Blo-Chr10:3069226 0 dispersed
Blo10g00229 Blo-Chr10:3069226 Blo11g00225 Blo-Chr11:1827807 0 dispersed
Blo10g00229 Blo-Chr10:3069226 Blo11g00372 Blo-Chr11:3154567 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12812 PF02309 AUX_IAA 7.80E-08 CL0072 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00229 - - csv:101208098 1203.73