Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo10g00251 | ATGGAAGGCGGGCCATATCCCGAGCGTCAAGGAGAGCCAGATTGTTCTTATTACATCAGAACCGGCATATGTAGATTCGGAGCAACATGCCGTTTTAACCATCCTCCCGATAGAAAGCTGGCTATTGCTACTGCAAGGATGAAGGGGGAATATCCCGAGAGAATCGGACAGCCGGAATGCCAGGCATTCATATTTATGAAATTTTTGTTTGAAAAGTGTTGTTACTACCTGAAGACTGGAACCTGCAAGTTTGGAGCAACATGCAAGTTTCATCATCCTAGAGACAAAGCTGGGATTGCTGGAAGAGTTTCCTTAAATATTTTAGGATATCCGCTTCGCCCGAACGAGATTGAATGTGCTTATTATTTAAGAACTGGGCTGTGCAAATTCGAAAGTACATGTAAATTCCATCACCCTCAGCCATCTAATATGATGATTCCCTTACGCGGTTCTCCTGTTTATCCGACCGTCCAGTCTCCAACTACTAGCCAACAGTCGTATCAAGGAGAAATTACAAATTGGTCAAGAGCGTCTTTTATTCCCAGTCCAAGATGGCAAGGCCCCTCTAGTTATGCACCCGTTATTCTACCGCAAGGACTAGTTTCTGTTCAAGGTTGGAATGCATACAGTGGAATCGTTAAGTACAAAAAGTTCTTGAAATTATTAGGTCCTCTCGGATCGGTTTCTTCTTCAAAGAGTCAGCAGCAAACATCGACAATTAGTCAGGTTTATGGAGCTTCACGTCAAAATGAATCTGGTAGTTTAGTCCCTGAAGTACCATTTTCTCCATTTCGTTCTGGCTCTGTTCCTGTTGGGTACTATGCATTGCAGAGGGACAATGTATTCCCCGAGCGACCTGGTGAGCCTGAGTGTCAGTTTTACATGAAAACTGGTGATTGCAAATTTGGTTTAGTATGTCGATTCCACCATCCGAGAGAGAGATTACTACCGGCTCCAGACTGTGTTTTGAGCTCCATCGGCCTTCCCTTACGTCCGGGAGAACCTTTATGCCTCTTCTATTCTCGTTATGGTATCTGCAAGTTCGGTCCAAGCTGCAAATTCGACCACCCGATGAGAATCTTCTCATACAATGTTCCCGCATCACAGTCGTCGGATTTGTCAGTTCGTCGTTTATTAGGTTCATCGTCGGGAGCATCAGCTCTAAATTTGTCCCCCGAAGGACTGATTGAAGCAGGTCCTACAAAGCCGAGGAGGCTCTCACTATCTGAGAGCAGACAGATGTCTTCTAGTGGCGATAATATTGACACAGATGAATGA | 1278 | 44.84 | MEGGPYPERQGEPDCSYYIRTGICRFGATCRFNHPPDRKLAIATARMKGEYPERIGQPECQAFIFMKFLFEKCCYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPNEIECAYYLRTGLCKFESTCKFHHPQPSNMMIPLRGSPVYPTVQSPTTSQQSYQGEITNWSRASFIPSPRWQGPSSYAPVILPQGLVSVQGWNAYSGIVKYKKFLKLLGPLGSVSSSKSQQQTSTISQVYGASRQNESGSLVPEVPFSPFRSGSVPVGYYALQRDNVFPERPGEPECQFYMKTGDCKFGLVCRFHHPRERLLPAPDCVLSSIGLPLRPGEPLCLFYSRYGICKFGPSCKFDHPMRIFSYNVPASQSSDLSVRRLLGSSSGASALNLSPEGLIEAGPTKPRRLSLSESRQMSSSGDNIDTDE | 425 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 3580778 | 3583245 | - | BLOR02041 | Blo10g00251 | 65447 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo10g00251 | 425 | PANTHER | PROTEIN PHOSPHATASE RELATED | 1 | 424 | - | - | |
Blo10g00251 | 425 | ProSiteProfiles | Zinc finger C3H1-type profile. | 331 | 359 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | ProSiteProfiles | Zinc finger C3H1-type profile. | 9 | 37 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | SUPERFAMILY | CCCH zinc finger | 334 | 358 | IPR036855 | GO:0046872 | |
Blo10g00251 | 425 | ProSiteProfiles | Zinc finger C3H1-type profile. | 67 | 95 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | MobiDBLite | consensus disorder prediction | 406 | 425 | - | - | |
Blo10g00251 | 425 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 333 | 358 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 71 | 94 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 11 | 36 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 287 | 312 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 118 | 140 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | Gene3D | - | 284 | 370 | - | - | |
Blo10g00251 | 425 | Gene3D | - | 72 | 148 | - | - | |
Blo10g00251 | 425 | Gene3D | - | 7 | 71 | - | - | |
Blo10g00251 | 425 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 33-RELATED | 1 | 424 | - | - | |
Blo10g00251 | 425 | SUPERFAMILY | CCCH zinc finger | 116 | 141 | IPR036855 | GO:0046872 | |
Blo10g00251 | 425 | ProSiteProfiles | Zinc finger C3H1-type profile. | 113 | 141 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | SMART | c3hfinal6 | 113 | 140 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | SMART | c3hfinal6 | 67 | 94 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | SMART | c3hfinal6 | 9 | 36 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | SMART | c3hfinal6 | 331 | 358 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | SMART | c3hfinal6 | 285 | 312 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | SUPERFAMILY | CCCH zinc finger | 66 | 96 | IPR036855 | GO:0046872 | |
Blo10g00251 | 425 | ProSiteProfiles | Zinc finger C3H1-type profile. | 285 | 313 | IPR000571 | GO:0046872 | |
Blo10g00251 | 425 | MobiDBLite | consensus disorder prediction | 392 | 425 | - | - | |
Blo10g00251 | 425 | SUPERFAMILY | CCCH zinc finger | 289 | 315 | IPR036855 | GO:0046872 | |
Blo10g00251 | 425 | SUPERFAMILY | CCCH zinc finger | 14 | 37 | IPR036855 | GO:0046872 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo10g00251 | Blo-Chr10:3580778 | Blo10g00044 | Blo-Chr10:418056 | 1.08E-99 | dispersed | |
Blo10g00251 | Blo-Chr10:3580778 | Blo11g00410 | Blo-Chr11:3563205 | 5.90E-08 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12813 | PF00642 | zf-CCCH | 1.60E-09 | CL0537 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo10g00251 | - | - | qsu:112012560 | 659.448 |