Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00255 ATGGGGTCCTGCCTTTCGATCGAAAGCAGGAGCCCTATTCCTGGATCACCAAATTCTCCCGCAATGGGAGCTAAGAAGAGAAAAACGTCAAAAAAACGATTAGGATCACGTAATTCTTCGTTTGACTATCGAAGGGAAGATCCTCTGCATCAAATTCCAGGGAGGATGTTCATGAATGGGTCTAGTGAAGTTGCTTCTTTGTTCACTCAACAAGGTAGGAAAGGGACCAACCAAGATGCCATGATTGTTTGGGAGAATTTCGGTTCAAGAAGTGATACAATCTTCTGTGGGGTGTTTGACGGGCATGGTCCGTATGGCCATATGGTTGCAAAGAGAGTGAGGGATTCTCTTCCTCTGAAAGTGAAAGCCCAGTGGGAATTCAATGCAGTGACTGAAGAAGTTCTCCCAGAACTCAGTCCTAATGCTAATAATGGAGGAACAATCCAGGACGAAGGTGAAGGAGTAGCTGGAGCCACCATTGACGGCACCCTATTGGACAAGCCTGCCGAAATTTTTCGTACATTGAAGGAATCATTTTTAAAGGCTTCTAAAATTATGGACAGAGAATTGAGGATGCACCCTAGTATTGATTGTTTCTGTAGCGGGACTACGGCCGTGACTTTGGTCAAGCAGGGGGAAAATCTTGTTATTGGAAATGTTGGAGATTCCAGAGCTGTAATGGCTACCAGAGATGAAGATGACTACCTTGTTGCAGTTCAGTTGACTGTTGATCTGAAACCAAACCTTCCTGGCGAAGAACAGAGAATCCGCAGCTGTAAAGGTCGGGTCTTTGCTCTTCAAGATGAACCAGAGGTTGCTCGAGTATGGCTTCCAAACAGCGACTCCCCAGGCCTGGCCATGGCGAGAGCTTTTGGAGATTTTTGTCTCAAGGATTTCGGTCTAATATCTGTTCCCGAAATAACTTGTCATCGACTAACCGAAAAGGATGAATTCGTTGTCATGGCTACCGATGGGCAATATATAATCGACTCGATTAATATCAACTCAACAATGCAAGTTTTCGTTGTCTCGATTAATAAAACTTGGATCGGTTTGGTTATGGTGAGAGTATTCAATGCAGTACGACTTTTTCTTGGTCTTCTATCAGTTGTTACAGAAACTGTTTTTGTCGTGTCACTCTCAAGGAAGTATGGAAAACGGCTTGCTTCTTATACACTTGCTATGCTATGCTTAACCAGTGGTTGTTTCTTTGCAAGCACTAGTTTCTTGCCAAGTTCATTCTCTATGTATGCGGTTTCTCTTTCATCTGGGTTATTTCTTCTTGAGAAACCTGCTCTTGCAGTTGCAGTTGCTGCTGTAGGTGTTATTCTTGGCTGGCCTTTTTCAATTTTGGTTTTTCTGCCAGTTGTTATATATTCTTTGCGCAGAAGGTTCTGGGAGGCATTTTTTGCAGGAGCTTTCACGTCTATTTTTCTTCTTGTTTTCTCCATACTTGTTGATCACTACTATTATGGAAGATGGACCTCATCAGTGTTGAATCTTCTTGTGTATAATGTTGTTGGAGGTGGCGAAAGCCATTTGTATGCGTTGCTATTTCTTGCAATTTTCCCTATTGCTAAGAAAAAATTTGCTCCAGATATGCTTGTGGTGGTTTCACCTGTATACCTTTGGCTGATATTCATGTCATTGCAGCCACACAAAGAAGAAAGGTGGCAAAATTTCTTAGACCCGTTGTTCTTGGCCTCATTCTATGTGTTATCCCATGCTCGTACCTTTTCATTAATTAATGGTTACTCTGCTCCTATAGAAACATACAAGCTTTTGGAGCACCATGACGATGTGGGAACAGGTGCTGTGCTTTGTGTTGGAAGTGAATGGCACAGATATCCATCATCTTTCTTTGTCCCTGATTTTGTGGGAGAAGTGAGATGGATTGATGATGGGTTTCAAGGTCTCCTTCCATTCCCATTCAATTCATCCATGGGAGGGACTAAAGCAGCTCCAGTTTATTTCAACGATAAGAACAAAGCGTCAGATGAGCAATATCTTAGAGATCTTGAAGCTTGCTCTCTGCTTGTGGAGCTGCAGCTAAATCGGCCTTACCCTTCTCGGGGAAGCAATTTGTCACAGTGGGAGGCTATTGCAGCGCTGCCTTACTTAGATAGAGAACTCTCTCCTCCTTTTTATCGATCCTTTTTCGTACCTTATCTCTGGCAACAGAGGAATGTCTTTGGCATGTACAAGCTGCTTAGAAGAATACCAAAATGA 2229 42.93 MGSCLSIESRSPIPGSPNSPAMGAKKRKTSKKRLGSRNSSFDYRREDPLHQIPGRMFMNGSSEVASLFTQQGRKGTNQDAMIVWENFGSRSDTIFCGVFDGHGPYGHMVAKRVRDSLPLKVKAQWEFNAVTEEVLPELSPNANNGGTIQDEGEGVAGATIDGTLLDKPAEIFRTLKESFLKASKIMDRELRMHPSIDCFCSGTTAVTLVKQGENLVIGNVGDSRAVMATRDEDDYLVAVQLTVDLKPNLPGEEQRIRSCKGRVFALQDEPEVARVWLPNSDSPGLAMARAFGDFCLKDFGLISVPEITCHRLTEKDEFVVMATDGQYIIDSININSTMQVFVVSINKTWIGLVMVRVFNAVRLFLGLLSVVTETVFVVSLSRKYGKRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAVSLSSGLFLLEKPALAVAVAAVGVILGWPFSILVFLPVVIYSLRRRFWEAFFAGAFTSIFLLVFSILVDHYYYGRWTSSVLNLLVYNVVGGGESHLYALLFLAIFPIAKKKFAPDMLVVVSPVYLWLIFMSLQPHKEERWQNFLDPLFLASFYVLSHARTFSLINGYSAPIETYKLLEHHDDVGTGAVLCVGSEWHRYPSSFFVPDFVGEVRWIDDGFQGLLPFPFNSSMGGTKAAPVYFNDKNKASDEQYLRDLEACSLLVELQLNRPYPSRGSNLSQWEAIAALPYLDRELSPPFYRSFFVPYLWQQRNVFGMYKLLRRIPK 742
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3605173 3616879 + BLOR02045 Blo10g00255 65451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00255 742 Gene3D - 59 340 IPR036457 -
Blo10g00255 742 SMART PP2C_4 56 378 IPR001932 -
Blo10g00255 742 MobiDBLite consensus disorder prediction 1 46 - -
Blo10g00255 742 MobiDBLite consensus disorder prediction 1 16 - -
Blo10g00255 742 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 328 - -
Blo10g00255 742 CDD PP2Cc 64 325 IPR001932 -
Blo10g00255 742 Pfam Protein phosphatase 2C 70 325 IPR001932 -
Blo10g00255 742 SUPERFAMILY PP2C-like 56 325 IPR036457 -
Blo10g00255 742 PANTHER ALPHABET, ISOFORM E-RELATED 1 328 - -
Blo10g00255 742 ProSiteProfiles PPM-type phosphatase domain profile. 64 380 IPR001932 -
Blo10g00255 742 Pfam Alg9-like mannosyltransferase family 346 515 IPR005599 GO:0016757
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00690 Blo-Chr3:29062542 Blo10g00255 Blo-Chr10:3605173 4.98E-159 dispersed
Blo10g00255 Blo-Chr10:3605173 Blo17g00516 Blo-Chr17:8221869 1.33E-157 dispersed
Blo10g00255 Blo-Chr10:3605173 Blo11g00408 Blo-Chr11:3551070 0 wgd
Blo10g00255 Blo-Chr10:3605173 Blo18g00505 Blo-Chr18:6370709 1.37E-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00255 - - pvy:116141626 508.064