Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo10g00280 | ATGAATCCCATATCTAAACAGGCTCCTCCATTAGTTGCCGGCACTAGGACTGTCGGCCATTTGTTCTCATCATCCTCAGCTTTTCACAGCAGTGTTCATTTTTCTTCCATTTCATCGCAACCTCAACCGTCGCCCTTCATTTCTCAGTCAGCGAGAGATGAAGCATTGTTGCCACCTACTCATTCATCTCATACAGAGTTACAGTCTACGACATTGACTATTAATACTGAAGAAAGTAGTATATCTTGGTCTTCCGAGCAACTTCATGGTCTTCTTGATTTTTCAGACAATGTTTTGGTTCAGAATGGCCAGGTTGAAAACACGAATGACGTCATAACAACAGATGACCATTCGAAAAGAACTGATTGGCCAACTTGGGCAGATCAGTTTATTTCTGTTGATGACGGCATTGAGCCAAATTGGAGTGACCTTTTTTCAGATGGTGATGGGCCAGCTCCCGAAGCGGTAAATTCGTCTTCTGAAACTCTTGGTCCACGGCCCCAGACCAGTAATGTAGATCATTTGCCACCTTCTTCTAACTCATTATCTTCTGCACCACCAACTAGACCAAGAATGCGTTGGACGCCAGAGCTTCACGAGGCTTTTGTGGAGGCAGTCGATCATCTTGGTGGCAGTGAAAAGGCCACTCCAAAGGGTGTCTTGAGGCTGATGAACGTTGAAGGGTTGACAATATATCATGTGAAAAGCCACCTGCAGAAATATCGAACTGCCAGATTTAAACCTGAGCCATCCAGTGGATCGTCAGAGAAAAAAATTGCCTCTGGTGAAGAAATGAAAAATCTAGACTTGAAGACGAGTTTGGGAATAACTGAAGCATTGCGAATGCAAATGGAAGTTCAGAAGCAGCTTCATGAACATCTGGAGATTCAAAGACATTTGCAGTTACGAATCGAAGAACAAGGAAGACGACTTCAGGAGATGTTTGAGAAACAAAGGAACATGGATGACACCAAGTTGAAGGCTTCTTCATCCACCTTAGACATACCCTCTTCTCCACAGCCAAATGCAGCGGAAATCGCCACTCCAACCAAAGAGAATTCTGGGCCTGTAAATGGCAAGAAGAATGGACGGGAAGCTGAAACAACCAAGAATGCCGAGCAACGTGAAGACAAACCTCAAAAACGAGCAAGAACAGAAGATGAGGAGGCATAA | 1173 | 44.33 | MNPISKQAPPLVAGTRTVGHLFSSSSAFHSSVHFSSISSQPQPSPFISQSARDEALLPPTHSSHTELQSTTLTINTEESSISWSSEQLHGLLDFSDNVLVQNGQVENTNDVITTDDHSKRTDWPTWADQFISVDDGIEPNWSDLFSDGDGPAPEAVNSSSETLGPRPQTSNVDHLPPSSNSLSSAPPTRPRMRWTPELHEAFVEAVDHLGGSEKATPKGVLRLMNVEGLTIYHVKSHLQKYRTARFKPEPSSGSSEKKIASGEEMKNLDLKTSLGITEALRMQMEVQKQLHEHLEIQRHLQLRIEEQGRRLQEMFEKQRNMDDTKLKASSSTLDIPSSPQPNAAEIATPTKENSGPVNGKKNGREAETTKNAEQREDKPQKRARTEDEEA | 390 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4032598 | 4035628 | - | BLOR02070 | Blo10g00280 | 65476 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo10g00280 | 390 | MobiDBLite | consensus disorder prediction | 141 | 192 | - | - | |
Blo10g00280 | 390 | MobiDBLite | consensus disorder prediction | 363 | 390 | - | - | |
Blo10g00280 | 390 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 187 | 246 | IPR017930 | - | |
Blo10g00280 | 390 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE | 2 | 378 | IPR044848 | GO:0003700 | |
Blo10g00280 | 390 | Gene3D | - | 188 | 247 | - | - | |
Blo10g00280 | 390 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 190 | 243 | IPR006447 | GO:0003677 | |
Blo10g00280 | 390 | PANTHER | PROTEIN PHR1-LIKE 1-LIKE ISOFORM X1 | 2 | 378 | - | - | |
Blo10g00280 | 390 | Pfam | MYB-CC type transfactor, LHEQLE motif | 276 | 320 | IPR025756 | - | |
Blo10g00280 | 390 | MobiDBLite | consensus disorder prediction | 153 | 188 | - | - | |
Blo10g00280 | 390 | Pfam | Myb-like DNA-binding domain | 191 | 242 | IPR001005 | - | |
Blo10g00280 | 390 | MobiDBLite | consensus disorder prediction | 325 | 357 | - | - | |
Blo10g00280 | 390 | MobiDBLite | consensus disorder prediction | 318 | 390 | - | - | |
Blo10g00280 | 390 | SUPERFAMILY | Homeodomain-like | 187 | 243 | IPR009057 | - | |
Blo10g00280 | 390 | MobiDBLite | consensus disorder prediction | 245 | 264 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo05g00493 | Blo10g00280 | CCT | |
Blo10g00280 | Blo11g00435 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo10g00280 | Blo-Chr10:4032598 | Blo05g00493 | Blo-Chr5:8182909 | 7.40E-59 | dispersed | |
Blo11g00313 | Blo-Chr11:2533079 | Blo10g00280 | Blo-Chr10:4032598 | 1.36E-17 | dispersed | |
Blo18g00480 | Blo-Chr18:5818249 | Blo10g00280 | Blo-Chr10:4032598 | 1.77E-18 | dispersed | |
Blo05g00238 | Blo-Chr5:2618718 | Blo10g00280 | Blo-Chr10:4032598 | 1.88E-17 | transposed | |
Blo09g00429 | Blo-Chr9:15261328 | Blo10g00280 | Blo-Chr10:4032598 | 1.96E-50 | transposed | |
Blo10g00280 | Blo-Chr10:4032598 | Blo11g00435 | Blo-Chr11:3810071 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12815 | PF00249 | Myb_DNA-binding | 3.60E-08 | CL0123 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo10g00280 | - | - | csv:101216567 | 390.963 |