Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00280 ATGAATCCCATATCTAAACAGGCTCCTCCATTAGTTGCCGGCACTAGGACTGTCGGCCATTTGTTCTCATCATCCTCAGCTTTTCACAGCAGTGTTCATTTTTCTTCCATTTCATCGCAACCTCAACCGTCGCCCTTCATTTCTCAGTCAGCGAGAGATGAAGCATTGTTGCCACCTACTCATTCATCTCATACAGAGTTACAGTCTACGACATTGACTATTAATACTGAAGAAAGTAGTATATCTTGGTCTTCCGAGCAACTTCATGGTCTTCTTGATTTTTCAGACAATGTTTTGGTTCAGAATGGCCAGGTTGAAAACACGAATGACGTCATAACAACAGATGACCATTCGAAAAGAACTGATTGGCCAACTTGGGCAGATCAGTTTATTTCTGTTGATGACGGCATTGAGCCAAATTGGAGTGACCTTTTTTCAGATGGTGATGGGCCAGCTCCCGAAGCGGTAAATTCGTCTTCTGAAACTCTTGGTCCACGGCCCCAGACCAGTAATGTAGATCATTTGCCACCTTCTTCTAACTCATTATCTTCTGCACCACCAACTAGACCAAGAATGCGTTGGACGCCAGAGCTTCACGAGGCTTTTGTGGAGGCAGTCGATCATCTTGGTGGCAGTGAAAAGGCCACTCCAAAGGGTGTCTTGAGGCTGATGAACGTTGAAGGGTTGACAATATATCATGTGAAAAGCCACCTGCAGAAATATCGAACTGCCAGATTTAAACCTGAGCCATCCAGTGGATCGTCAGAGAAAAAAATTGCCTCTGGTGAAGAAATGAAAAATCTAGACTTGAAGACGAGTTTGGGAATAACTGAAGCATTGCGAATGCAAATGGAAGTTCAGAAGCAGCTTCATGAACATCTGGAGATTCAAAGACATTTGCAGTTACGAATCGAAGAACAAGGAAGACGACTTCAGGAGATGTTTGAGAAACAAAGGAACATGGATGACACCAAGTTGAAGGCTTCTTCATCCACCTTAGACATACCCTCTTCTCCACAGCCAAATGCAGCGGAAATCGCCACTCCAACCAAAGAGAATTCTGGGCCTGTAAATGGCAAGAAGAATGGACGGGAAGCTGAAACAACCAAGAATGCCGAGCAACGTGAAGACAAACCTCAAAAACGAGCAAGAACAGAAGATGAGGAGGCATAA 1173 44.33 MNPISKQAPPLVAGTRTVGHLFSSSSAFHSSVHFSSISSQPQPSPFISQSARDEALLPPTHSSHTELQSTTLTINTEESSISWSSEQLHGLLDFSDNVLVQNGQVENTNDVITTDDHSKRTDWPTWADQFISVDDGIEPNWSDLFSDGDGPAPEAVNSSSETLGPRPQTSNVDHLPPSSNSLSSAPPTRPRMRWTPELHEAFVEAVDHLGGSEKATPKGVLRLMNVEGLTIYHVKSHLQKYRTARFKPEPSSGSSEKKIASGEEMKNLDLKTSLGITEALRMQMEVQKQLHEHLEIQRHLQLRIEEQGRRLQEMFEKQRNMDDTKLKASSSTLDIPSSPQPNAAEIATPTKENSGPVNGKKNGREAETTKNAEQREDKPQKRARTEDEEA 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4032598 4035628 - BLOR02070 Blo10g00280 65476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00280 390 MobiDBLite consensus disorder prediction 141 192 - -
Blo10g00280 390 MobiDBLite consensus disorder prediction 363 390 - -
Blo10g00280 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 187 246 IPR017930 -
Blo10g00280 390 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 378 IPR044848 GO:0003700
Blo10g00280 390 Gene3D - 188 247 - -
Blo10g00280 390 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 190 243 IPR006447 GO:0003677
Blo10g00280 390 PANTHER PROTEIN PHR1-LIKE 1-LIKE ISOFORM X1 2 378 - -
Blo10g00280 390 Pfam MYB-CC type transfactor, LHEQLE motif 276 320 IPR025756 -
Blo10g00280 390 MobiDBLite consensus disorder prediction 153 188 - -
Blo10g00280 390 Pfam Myb-like DNA-binding domain 191 242 IPR001005 -
Blo10g00280 390 MobiDBLite consensus disorder prediction 325 357 - -
Blo10g00280 390 MobiDBLite consensus disorder prediction 318 390 - -
Blo10g00280 390 SUPERFAMILY Homeodomain-like 187 243 IPR009057 -
Blo10g00280 390 MobiDBLite consensus disorder prediction 245 264 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00493 Blo10g00280 CCT
Blo10g00280 Blo11g00435 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00280 Blo-Chr10:4032598 Blo05g00493 Blo-Chr5:8182909 7.40E-59 dispersed
Blo11g00313 Blo-Chr11:2533079 Blo10g00280 Blo-Chr10:4032598 1.36E-17 dispersed
Blo18g00480 Blo-Chr18:5818249 Blo10g00280 Blo-Chr10:4032598 1.77E-18 dispersed
Blo05g00238 Blo-Chr5:2618718 Blo10g00280 Blo-Chr10:4032598 1.88E-17 transposed
Blo09g00429 Blo-Chr9:15261328 Blo10g00280 Blo-Chr10:4032598 1.96E-50 transposed
Blo10g00280 Blo-Chr10:4032598 Blo11g00435 Blo-Chr11:3810071 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12815 PF00249 Myb_DNA-binding 3.60E-08 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00280 - - csv:101216567 390.963