Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00304 ATGGCTCTAAGGTTCAGAAAACACGGTGAAGTAGCTTTCGTTGATTGCGAACGATACTCTGGAGTGAAGAACCACAGGCGTAGATGGAGGTTGGCTTTTACTGCCATTAATTTTACTCGATTTCTTTTTTCTTTAACGAAGAAAGTTTGCGAAAACAAAAATATTATCTTTCCCTCTCTCTCACATGTGGCCATTGACGTGGAGCTCGATCGGGGTCCACAAATTCCTATTGTTTCTGCTGATCGGAAAACCCTAGGCGTCATGGTGAGGGAGAAGAGATCTGATGTGTTGAATCAGTTCGGAGGTGTAAATCATTTGGCTGCCATTCTTGAAACTGACGTTAAAAAAGGAGTTGCCGGTACTGAGACTGACCTTGCTCTTAGAAAGAGACTGTTTGGTTCTAATACGTTTGAGAAACCTCCCGCCAAAGTTTTTTTTAAATTTGTTCTTGAAGCGTTGAGCGATCCAACTATCATTATTCTCTTGATCTGTGCAACTTTTGCTCTCGGCTTCGGAATCAAACAGAGCGGTTGGGGCGATGGATGGTTTGACGGAGGGAGTATCATATTCGCCGTCTTTCTCGTTGTTATAATCTCTTCCATCAGCAACTACAACCAATCTCGACAGTTCGTGAAGCTTTCGGCCAAGAGCGGTGACATAAAGGTTGAAGTGGTGAGAGGAGGACGGAGGCAATCCATCTCCATCTTCGACGTTGTGGTGGGCGATCTCGTGTGTTTGAACATCGGAGGTCAAGTACCTGCAGATGGATTGATCTTGGAAGGAACTCCGTTAATGGTGGACGAGTCGAGCATGACAGGGGAGAGTGATCATGTGGAGGTGAATCACATCAATAATCCTTTCTTGCTATCTGGGACAAAGGTAATGGATGGCTATGGCGTTATGCTAGTCACTTCTGTCGGGATGAACACAGCCTGGGGCGAGATGATGAGCACGGTAAGCCACGAAGTGAATGAGGAAACTCCCTTACAAGAGCGTCTCAACAAAATGACATCTTACATTGGAAAAATTGGCCTCACTGTCGCCGTAGTTGTTCTATTTGTTCTATCTATTCGATATTTTACTGGACACACCAAAGATGAGAATGGTAATCGGGAATTTAACGGAAAAAAGACGAAATTCGACGATGTGGTGGATGCTGTAATCGGAATCATCTCTGCAGCCGTGACGATTGTTGTTGTGGCTATCCCAGAAGGTTTGCCTCTGGCTGTTACTTTGACTCTCGCATATTCAATGAAGAAGATGATGAGAGACAATGCCATGGTGAGAAAACTATCTGCATGTGAGACAATGGGGTCAGCCACGATAATATGCACAGACAAAACAGGCACGCTTACTCTTAACGAGATGAAAGTTACAAAGTTTTGGCTCGGAAAAGAAGAGATGAAGGAGGAGGATACCTCCAATATAGCTGCCAATATTCTCCGATTACTGCAACAAGCCATTGGTCTAAACACTACTGNNNNNNNNACCAAACACATTTGCATCAAATTATTACAATCCATATTTTACATGTAG 1536 43.68 MALRFRKHGEVAFVDCERYSGVKNHRRRWRLAFTAINFTRFLFSLTKKVCENKNIIFPSLSHVAIDVELDRGPQIPIVSADRKTLGVMVREKRSDVLNQFGGVNHLAAILETDVKKGVAGTETDLALRKRLFGSNTFEKPPAKVFFKFVLEALSDPTIIILLICATFALGFGIKQSGWGDGWFDGGSIIFAVFLVVIISSISNYNQSRQFVKLSAKSGDIKVEVVRGGRRQSISIFDVVVGDLVCLNIGGQVPADGLILEGTPLMVDESSMTGESDHVEVNHINNPFLLSGTKVMDGYGVMLVTSVGMNTAWGEMMSTVSHEVNEETPLQERLNKMTSYIGKIGLTVAVVVLFVLSIRYFTGHTKDENGNREFNGKKTKFDDVVDAVIGIISAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMRDNAMVRKLSACETMGSATIICTDKTGTLTLNEMKVTKFWLGKEEMKEEDTSNIAANILRLLQQAIGLNTTXXXTKHICIKLLQSIFYM 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4545456 4546991 - BLOR02094 Blo10g00304 65500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00304 511 Gene3D - 441 453 IPR023214 -
Blo10g00304 511 Gene3D - 454 471 IPR023299 GO:0000166
Blo10g00304 511 SUPERFAMILY Calcium ATPase, transduction domain A 221 319 IPR008250 -
Blo10g00304 511 Pfam Cation transporter/ATPase, N-terminus 102 167 IPR004014 -
Blo10g00304 511 Gene3D - 124 320 - -
Blo10g00304 511 Gene3D - 151 440 - -
Blo10g00304 511 SUPERFAMILY Calcium ATPase, transmembrane domain M 101 438 IPR023298 -
Blo10g00304 511 ProSitePatterns E1-E2 ATPases phosphorylation site. 446 452 IPR018303 -
Blo10g00304 511 Pfam E1-E2 ATPase 220 423 - -
Blo10g00304 511 PANTHER CALCIUM-TRANSPORTING ATPASE 21 493 - -
Blo10g00304 511 PANTHER CATION TRANSPORTING ATPASE 21 493 - -
Blo10g00304 511 SUPERFAMILY HAD-like 432 462 IPR036412 -
Blo10g00304 511 PRINTS P-type cation-transporting ATPase superfamily signature 267 281 - -
Blo10g00304 511 PRINTS P-type cation-transporting ATPase superfamily signature 444 458 - -
Blo10g00304 511 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 388 473 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00304 Blo-Chr10:4545456 Blo12g00345 Blo-Chr12:19397056 2.01E-159 dispersed
Blo10g00303 Blo-Chr10:4532985 Blo10g00304 Blo-Chr10:4545456 0 tandem
Blo10g00304 Blo-Chr10:4545456 Blo10g00305 Blo-Chr10:4574950 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00304 K01537 - qsu:111992620 624.78