Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00305 ATGGCTCTAAGGTTCAGAAAACACGATGAAGTAGCTTTCGCTGATTGCGAACGATACTCTGGAGCAAAGAACCACAGGCGTAGATGGAGGTTGGCTTTTACTGCGATTAATTTTACTCGATTTCTTGTTTCTTTATCGAAGAAAGTTTGCGAAAACAAGAATATTATCTTTCCCTCTCTCCCATATGTGGTCATTGACGTGGAGCTCGATCGGGATCCACAAATTCCTATTGTTTCTGCTGATCGGAAAACCCTAGGCGACATGGTGAGGGAGAAGAGATCTGATGTGTTGAATCAGTTCGGAGGTGTAAATGATTTGGCTGCGATTCTTGAAACTGACGTTAAAAAAGGAGTTGCCGGTACTGAGACTGACCTTGCTCTTAGAAAGAGTCTGTTTGGTTCGAATACGTTTGAGAAACCTCCCCCCAAAGTTTTTTTGAAATTTGTTCTTGAAGCGTTGAGCGATCCAACTATCATTATTCTCTTGATCTGTGCAACTTTTGCTCTCGGCTTCGGAATCAAACAGCACGGTTGGGGCGATGGATGGTTTGACGGCGGGAGTATCATATTCGCCGTTTTTCTCGTTGTTATAATCTCTTCCATCAGTAACTACAACCAATCTCGACAGTTCGTGAAGCTTTCGGCCAAGAGCGGTGACATAAAGGTTGAAGTGGTGAGAGGAGGACGGAGGCAATCCATCTCCATCTTCAACATTGTGGTGGGCGATCTCGTGTGTTTGAATATCGGAGGTCAAGTACCCGCAGATGGATTGTGCTTGGAAGGAACTCCGTTAATGGTGGACGAGTCGAGCACGACAGGGGAAAGTGATCATGTGGAGGTGAATCACATCAATAATCCTTTCTTGCTATCTGGGACAAAGGTAATGGATGGCTATGGCGTTATGCTAGTCACTTCTGTCGGGATGAACACAGCCTGGGGCGAGATGATGAGCACGGTATGCCGTGAAGTGAATGAGGAAACTCCCTTACAAGAGCGTCTCAACAAAATGACATCTTACATTGGAAAAATTGGCCTCACTGTCGCCATAGTTGTTCTATTTGTTCTATCTATTCGTTATTTTACTGGGCACACCAAAGATGAGAAGGGAAATCGGGAATTTAACGGAAAAAAGACGAAATTCGACGATGTGATGGATGCTGTAATCGGAATCATCTCTGCAGCCGTGACGATTGTTGTTGTGGCTATCCCAGAAGGTTTGCCGCTTGCTGTTACTTTGACTCTTGCATATTCAATGAAGAAGATGATGAGAGACAATGCCATGGTGAGAAAACTATCTGCATGCGAGACAATGGGGTCAGCCACGACAATATGCACAGACAAAACAGGCACGCTTACTCTTAACGAGATGAAAGTTACAAAGTTTTGGCTCGGAAAAGAAGAGATGAAGAAGAAGGATACCTCGAATATAGCTGCCAATATTCTCCGATTACTGCAACAAGCCATTGGTCTAAACACTACTGGAAATGTTCATAGACCGACTTGTTCTTCACCTCCTGAGATTTCTGGCAGCCCAACAGAGAAAGCTTTGCTTCTTTGGGCAGTGACCGAACTGGATGTGAACATTGATAAACTGAAGCAATGTAATGAAATTATCCATGTGGCGACCTTCAATTCAGAGAAAAAGAAAAGTGGAATTTTGATTAGGGATAATGAGAAGAAGACTCAGACTCACTGGAAAGGAGCTGCTGAGATGATATTAGCAATGTGTTCGCATTATTATGATAAGGCGGGGACTGTAACAGCCATGGACGAAGGGGAAAGAAAACAGCTTGATACAATTATATCGAACATGGCAGGGAAAAGCTTACGATGCATAGCCTTTGCCCACAAAAAAGCTGAAGAAGAAAATGGGAATGTTCACCTCGAAGAATCCGGTTTGATTTTACTAGGAATTGCGGGTTTGAAAGATCCATGTCGAGAAGGAGTTAAAACAGCCATTGAAGCTTGCAAAGCTGCAGGAGTGAACATCAAAATGATCACAGGTGATAATGTGCATACAGCCAGGGCAATAGCCATTGAATGTGGTATACTCAATATCACTGAAAGTCTAGACATTGATGCCGTGATAGAAGGATCTCAATTTAGAAATTACTCACCAGAAGAGAGAATGGAGAAGATTGAGAAAATCAAAGTAATGGCTCGATCCTCCCCATTCGACAAGCTGCAGATGGTGCGGAGCTTGAAGGAGAAAGGCCACGTAGTAGCAGTCACAGGCGACGGAACAAACGATGCTCCGGCCTTAAAAGAAGCCGATATTGGACTTTCTATGGGAATTCAAGGCACTGAAGTGGCAAAAGAGAGCTCGGATATAGTAATTCTGGACGACAATTTCACATCTGTGATGACAGTTTTGAGGTGGGGAAGATGTGTTTATAACAACATTCAGAAATTCATCCAATTTCAGCTCACCGTCAATGTCGCCGCCCTCGCAATCAACTTCGTCGCAGCTTTATATTCCGGAAAAGTCCCTCTAACAGCAGTTCAGCTCCTGTGGGTGAATCTCATAATGGACACTCTAGGAGCTTTAGCTTTGGCCACCGAACAACCAAGCGACGACCTCATGGAAACCCCGCCGGTGGGACGAACGGAGCCGTTGATCACCCGAGTCATGTGGAGAAACCTCATTGCTCAGGCCCTTTACCAAGTAACCATCTTGCTAGTCTTAGAATTCAAGGGAAGATCCATCTTCAACGTGAACGAAGCTGTCAAGAACACGCTCATTTTCAACACCTTCGTCCTCTGCCAGATCTTTAACGAGTTCAACGCAAGGAAGCTGGAGAAGAAGAACATATTCAAAGGGCTACATAAAAATAAGCTCTTTTTAGCCATAGTTGGGATCACCATTGTTCTTCAACTGCTAATGGTTGAGTTCTTGAAGAAGTTTGCTAACACAGAGAGGCTGAATTGGGGCCAGTGGGGTGCTTGCACGGGCATCGCCGCATTATCTTGGCCAATCGGGTGGTTGGTCAAATGCATAACGATTTGA 3006 44.44 MALRFRKHDEVAFADCERYSGAKNHRRRWRLAFTAINFTRFLVSLSKKVCENKNIIFPSLPYVVIDVELDRDPQIPIVSADRKTLGDMVREKRSDVLNQFGGVNDLAAILETDVKKGVAGTETDLALRKSLFGSNTFEKPPPKVFLKFVLEALSDPTIIILLICATFALGFGIKQHGWGDGWFDGGSIIFAVFLVVIISSISNYNQSRQFVKLSAKSGDIKVEVVRGGRRQSISIFNIVVGDLVCLNIGGQVPADGLCLEGTPLMVDESSTTGESDHVEVNHINNPFLLSGTKVMDGYGVMLVTSVGMNTAWGEMMSTVCREVNEETPLQERLNKMTSYIGKIGLTVAIVVLFVLSIRYFTGHTKDEKGNREFNGKKTKFDDVMDAVIGIISAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMRDNAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTKFWLGKEEMKKKDTSNIAANILRLLQQAIGLNTTGNVHRPTCSSPPEISGSPTEKALLLWAVTELDVNIDKLKQCNEIIHVATFNSEKKKSGILIRDNEKKTQTHWKGAAEMILAMCSHYYDKAGTVTAMDEGERKQLDTIISNMAGKSLRCIAFAHKKAEEENGNVHLEESGLILLGIAGLKDPCREGVKTAIEACKAAGVNIKMITGDNVHTARAIAIECGILNITESLDIDAVIEGSQFRNYSPEERMEKIEKIKVMARSSPFDKLQMVRSLKEKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVMTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAALYSGKVPLTAVQLLWVNLIMDTLGALALATEQPSDDLMETPPVGRTEPLITRVMWRNLIAQALYQVTILLVLEFKGRSIFNVNEAVKNTLIFNTFVLCQIFNEFNARKLEKKNIFKGLHKNKLFLAIVGITIVLQLLMVEFLKKFANTERLNWGQWGACTGIAALSWPIGWLVKCITI 1001
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4574950 4577955 - BLOR02095 Blo10g00305 65501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00305 1001 Pfam E1-E2 ATPase 220 423 - -
Blo10g00305 1001 Pfam haloacid dehalogenase-like hydrolase 441 758 - -
Blo10g00305 1001 SFLD Haloacid Dehalogenase 426 797 - -
Blo10g00305 1001 Pfam Cation transporter/ATPase, N-terminus 102 167 IPR004014 -
Blo10g00305 1001 PRINTS P-type cation-transporting ATPase superfamily signature 744 763 - -
Blo10g00305 1001 PRINTS P-type cation-transporting ATPase superfamily signature 768 780 - -
Blo10g00305 1001 PRINTS P-type cation-transporting ATPase superfamily signature 267 281 - -
Blo10g00305 1001 PRINTS P-type cation-transporting ATPase superfamily signature 444 458 - -
Blo10g00305 1001 PRINTS P-type cation-transporting ATPase superfamily signature 637 648 - -
Blo10g00305 1001 PRINTS P-type cation-transporting ATPase superfamily signature 659 669 - -
Blo10g00305 1001 Gene3D - 441 789 IPR023214 -
Blo10g00305 1001 SUPERFAMILY Calcium ATPase, transduction domain A 221 319 IPR008250 -
Blo10g00305 1001 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 450 649 IPR023299 GO:0000166
Blo10g00305 1001 SFLD p-type atpase 426 797 IPR044492 -
Blo10g00305 1001 SUPERFAMILY Calcium ATPase, transmembrane domain M 101 1000 IPR023298 -
Blo10g00305 1001 SUPERFAMILY HAD-like 442 849 IPR036412 -
Blo10g00305 1001 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 715 831 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo10g00305 1001 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 388 470 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo10g00305 1001 PRINTS H+-transporting ATPase (proton pump) signature 597 615 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo10g00305 1001 PRINTS H+-transporting ATPase (proton pump) signature 776 801 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo10g00305 1001 PRINTS H+-transporting ATPase (proton pump) signature 744 760 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo10g00305 1001 CDD P-type_ATPase_Ca_PMCA-like 125 877 - -
Blo10g00305 1001 Gene3D - 151 998 - -
Blo10g00305 1001 PANTHER CALCIUM-TRANSPORTING ATPASE 22 991 - -
Blo10g00305 1001 ProSitePatterns E1-E2 ATPases phosphorylation site. 446 452 IPR018303 -
Blo10g00305 1001 Gene3D - 454 644 IPR023299 GO:0000166
Blo10g00305 1001 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 93 1000 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Blo10g00305 1001 PANTHER CATION TRANSPORTING ATPASE 22 991 - -
Blo10g00305 1001 Pfam Cation transporting ATPase, C-terminus 829 998 IPR006068 -
Blo10g00305 1001 Gene3D - 124 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00303 Blo-Chr10:4532985 Blo10g00305 Blo-Chr10:4574950 0 dispersed
Blo10g00305 Blo-Chr10:4574950 Blo12g00345 Blo-Chr12:19397056 0 dispersed
Blo11g00145 Blo-Chr11:1155762 Blo10g00305 Blo-Chr10:4574950 8.90E-134 dispersed
Blo10g00304 Blo-Chr10:4545456 Blo10g00305 Blo-Chr10:4574950 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00305 K01537 - qsu:111992620 1421.76