Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00321 ATGGATTCTTCATCCGCCTTCTTCTCTCGTTCATCTTCGTCTTCCTCTTCAATGGAATCTTCCTCGTGGACAACCAACTTTATTTTTGAGAACAATCTCTTGCCTTTCAATCAGAACGATTCCGAGGAAAAGCTACTCTACAGAGTTCTTACGGAGGCCGATTATCCGACCAACGTCGCTAAGGATCAGGATGAGGTGAACTCGAAATCATTGAAAGCTTCAGAGGTTTCTTACAGAGGAGTGAGGAGAAGGCCGTGGGGAAAATTCGCGGCGGAGATCCGTGACTCAACGAGAAATGGAGTGAGGGTTTGGCTGGGGACGTTCGACACGGCGGAGGCGGCTGCGCTGGCTTACGATCAAGCTGCATTCGCGATGCGAGGATCAACAGCGGTGCTTAATTTCCCGGCGCAAATGGTGGAGCAATCGCTCTGCGAGATGAATTGCGGATTGGACGAAGGAGGTTCCCCTGTTCTGGCTCTGAAAAAGAGGAATTCGATGAAAAGAAAACCTAGATGTTCGAAGGAGGAAGAGAACGAAGAAAACGTGGTGGTATTTGAAGATTTGGGAGCAGATTATTTGGAGGAGCTTCTGGGGTTGTCCGACGCTTCGTCTACTCCCTGCTGA 624 49.52 MDSSSAFFSRSSSSSSSMESSSWTTNFIFENNLLPFNQNDSEEKLLYRVLTEADYPTNVAKDQDEVNSKSLKASEVSYRGVRRRPWGKFAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAAFAMRGSTAVLNFPAQMVEQSLCEMNCGLDEGGSPVLALKKRNSMKRKPRCSKEEENEENVVVFEDLGADYLEELLGLSDASSTPC 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4858049 4858672 - BLOR02111 Blo10g00321 65517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00321 207 Pfam AP2 domain 78 127 IPR001471 GO:0003700|GO:0006355
Blo10g00321 207 SUPERFAMILY DNA-binding domain 78 136 IPR016177 GO:0003677
Blo10g00321 207 SMART rav1_2 77 141 IPR001471 GO:0003700|GO:0006355
Blo10g00321 207 MobiDBLite consensus disorder prediction 1 20 - -
Blo10g00321 207 ProSiteProfiles AP2/ERF domain profile. 77 135 IPR001471 GO:0003700|GO:0006355
Blo10g00321 207 CDD AP2 78 137 IPR001471 GO:0003700|GO:0006355
Blo10g00321 207 Gene3D AP2/ERF domain 77 137 IPR036955 GO:0003700|GO:0006355
Blo10g00321 207 PANTHER DNA-BINDING DOMAIN 27 200 IPR044808 GO:0003700|GO:0009873
Blo10g00321 207 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 27 200 - -
Blo10g00321 207 PRINTS Ethylene responsive element binding protein signature 101 117 IPR001471 GO:0003700|GO:0006355
Blo10g00321 207 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00321 Blo-Chr10:4858049 Blo10g00644 Blo-Chr10:20106488 2.76E-54 dispersed
Blo10g00321 Blo-Chr10:4858049 Blo11g00448 Blo-Chr11:3962976 3.17E-85 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12820 PF00847 AP2 2.40E-15 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00321 K14516 - qsu:112003251 218.779