Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo10g00321 | ATGGATTCTTCATCCGCCTTCTTCTCTCGTTCATCTTCGTCTTCCTCTTCAATGGAATCTTCCTCGTGGACAACCAACTTTATTTTTGAGAACAATCTCTTGCCTTTCAATCAGAACGATTCCGAGGAAAAGCTACTCTACAGAGTTCTTACGGAGGCCGATTATCCGACCAACGTCGCTAAGGATCAGGATGAGGTGAACTCGAAATCATTGAAAGCTTCAGAGGTTTCTTACAGAGGAGTGAGGAGAAGGCCGTGGGGAAAATTCGCGGCGGAGATCCGTGACTCAACGAGAAATGGAGTGAGGGTTTGGCTGGGGACGTTCGACACGGCGGAGGCGGCTGCGCTGGCTTACGATCAAGCTGCATTCGCGATGCGAGGATCAACAGCGGTGCTTAATTTCCCGGCGCAAATGGTGGAGCAATCGCTCTGCGAGATGAATTGCGGATTGGACGAAGGAGGTTCCCCTGTTCTGGCTCTGAAAAAGAGGAATTCGATGAAAAGAAAACCTAGATGTTCGAAGGAGGAAGAGAACGAAGAAAACGTGGTGGTATTTGAAGATTTGGGAGCAGATTATTTGGAGGAGCTTCTGGGGTTGTCCGACGCTTCGTCTACTCCCTGCTGA | 624 | 49.52 | MDSSSAFFSRSSSSSSSMESSSWTTNFIFENNLLPFNQNDSEEKLLYRVLTEADYPTNVAKDQDEVNSKSLKASEVSYRGVRRRPWGKFAAEIRDSTRNGVRVWLGTFDTAEAAALAYDQAAFAMRGSTAVLNFPAQMVEQSLCEMNCGLDEGGSPVLALKKRNSMKRKPRCSKEEENEENVVVFEDLGADYLEELLGLSDASSTPC | 207 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 4858049 | 4858672 | - | BLOR02111 | Blo10g00321 | 65517 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo10g00321 | 207 | Pfam | AP2 domain | 78 | 127 | IPR001471 | GO:0003700|GO:0006355 | |
Blo10g00321 | 207 | SUPERFAMILY | DNA-binding domain | 78 | 136 | IPR016177 | GO:0003677 | |
Blo10g00321 | 207 | SMART | rav1_2 | 77 | 141 | IPR001471 | GO:0003700|GO:0006355 | |
Blo10g00321 | 207 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Blo10g00321 | 207 | ProSiteProfiles | AP2/ERF domain profile. | 77 | 135 | IPR001471 | GO:0003700|GO:0006355 | |
Blo10g00321 | 207 | CDD | AP2 | 78 | 137 | IPR001471 | GO:0003700|GO:0006355 | |
Blo10g00321 | 207 | Gene3D | AP2/ERF domain | 77 | 137 | IPR036955 | GO:0003700|GO:0006355 | |
Blo10g00321 | 207 | PANTHER | DNA-BINDING DOMAIN | 27 | 200 | IPR044808 | GO:0003700|GO:0009873 | |
Blo10g00321 | 207 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B | 27 | 200 | - | - | |
Blo10g00321 | 207 | PRINTS | Ethylene responsive element binding protein signature | 101 | 117 | IPR001471 | GO:0003700|GO:0006355 | |
Blo10g00321 | 207 | PRINTS | Ethylene responsive element binding protein signature | 78 | 89 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo10g00321 | Blo-Chr10:4858049 | Blo10g00644 | Blo-Chr10:20106488 | 2.76E-54 | dispersed | |
Blo10g00321 | Blo-Chr10:4858049 | Blo11g00448 | Blo-Chr11:3962976 | 3.17E-85 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12820 | PF00847 | AP2 | 2.40E-15 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo10g00321 | K14516 | - | qsu:112003251 | 218.779 |