Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00372 ATGGGACATTTGTCTTCCATGTTAGATGGATTGGCAAAGTCGTTTTCTAGGAGGAAGGGGCGAAACATGGACAATGCTGGGGGAGGAGAAGCTGGAGGAGCCATGGAAAAGGATGCAAAGAAAAAGGATTTAATTTTACGTACATCCAGTAGTGTGAACTTCGATGGTTCCAGCAATTTTGCCTCCGTGTGTTCTAAGAAAGGCGAGAAAGGAGTAAATCAAGATTGTTGCATAGTTTGGGAGGAATTTGGATGTCAGGAGGACATGATCTTCTGTGGGATTTTTGATGGTCATGGGCCATGGGGCCATTTTGTTGCCAAAAATGCTAGAGATTCAATGCCATCAGCCCTTTTGTGTAATTGGCAAGAAGCTCTATCCCAATCGTCCTACATATGCGACGAGGACTCTGACTCCGGAAAAAACCACCAACGCTTCCAGCTATGGAAAAACTCTTACGTAAAAACTAGTGCGGCTATCGATCAGCAGCTCGAGCATCATCGGAAAATCGACTCGTTTTACAGTGGATCGACTGCCTTGTCAATTGTCAGACAGGGTGAGCTAATAGTCATAGCTAATGTGGGAGACTCTCGTGCTGTGTTAGCAACATCGTCGGATGAGGGAAGCCTAGTGCCAGTTCAACTTTCTGTAGATTTCAAGCCCAATTTGCCCCAGGAGGCAGAGCGGATAGCTCAGTGCAACGGCCGAGTGTTTTGCTTAGACGATGAGCCTGGAGTTCACAGGGTGTGGCTACCGCATAAGCAATCACCTGGACTGTCCATGTCCAGAGCGTTGGGTGATTACTGTGTCAAAGGCTTCGGACTCATTTCGGTTCCAGAAGTGACTCAGCGAATCATAACAAGTGAAGATCACTTTCTTATCCTGGCAACTGATGGGGTGTGGGACGTAATTTCGAATCAAGAAGCGGTGGCGATTGTTTCGTCAGCACCGGAACGAGCAAAGTCGGCCAAGCGTCTGGTGAAGGCAGCGGCTCAAGCATGGAGACGCAAGCGGCCAGGAATTGCAAGGGACGACATATCGGCCATATGCCTCTTCCTTCACCCTTGTCCTTAA 1071 48.27 MGHLSSMLDGLAKSFSRRKGRNMDNAGGGEAGGAMEKDAKKKDLILRTSSSVNFDGSSNFASVCSKKGEKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKNARDSMPSALLCNWQEALSQSSYICDEDSDSGKNHQRFQLWKNSYVKTSAAIDQQLEHHRKIDSFYSGSTALSIVRQGELIVIANVGDSRAVLATSSDEGSLVPVQLSVDFKPNLPQEAERIAQCNGRVFCLDDEPGVHRVWLPHKQSPGLSMSRALGDYCVKGFGLISVPEVTQRIITSEDHFLILATDGVWDVISNQEAVAIVSSAPERAKSAKRLVKAAAQAWRRKRPGIARDDISAICLFLHPCP 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6120224 6121721 - BLOR02162 Blo10g00372 65568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00372 356 CDD PP2Cc 59 352 IPR001932 -
Blo10g00372 356 Pfam Protein phosphatase 2C 86 328 IPR001932 -
Blo10g00372 356 SUPERFAMILY PP2C-like 52 354 IPR036457 -
Blo10g00372 356 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Blo10g00372 356 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 356 - -
Blo10g00372 356 SMART PP2C_4 49 350 IPR001932 -
Blo10g00372 356 Gene3D - 48 353 IPR036457 -
Blo10g00372 356 PANTHER ALPHABET, ISOFORM E-RELATED 1 356 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo10g00372 Blo18g00505 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00372 Blo-Chr10:6120224 Blo11g00408 Blo-Chr11:3551070 6.83E-107 dispersed
Blo10g00372 Blo-Chr10:6120224 Blo11g00523 Blo-Chr11:4816981 2.05E-126 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00372 - - jre:108985402 543.502