Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00373 ATGGCTGATGGCGATGATTCTAAAAAGACGAAGAGATTCGCCATTATTGGCATCTCTTCCTTCTTGCTCGTCTCCATGGTGGTAGCTGTTACCGTCGGAGTTAACATCAACGACGACGGTTCCTCTGACCCTGTGAGCAGTAACAAATCTCACGAGCTTTCTTCCTCCATTAAAGCCATCCAAGCTATCTGCGAAACAACGGATTACAAAACCGATTGCGTCAGTAGCCTCAAGGATTCGGCCGGAGACACAACTGACCCAAAAGATCTGATTCAAGCAGGGTTCAAAGCCGCCATTAAATACGTCAGAGAAGCTGCAAAGAAATCAACTACTCTTGAAGAGCTGGAGAAAGATCCGAGGGCTGCCAAGGCGCTTGCCAATTGCAAAGAGCTGATGGATTCCGCCATTGTTGATCTACAACAATCTGTTGACAAAATGGGAGAGTTTGATTTCACGAAGTTGAATGAAATGCTTGAGGATTTGAAGATTTGGCTCAGTGCTTCGATCACGTATCAAGAGACTTGTTTGGATGGATTCGAAAACACGACGAGCTCAGCCGCCAAGAAGATGAAATCGGCGCTGAAAACTTCGATGAGATTGAGCAGCAATGGCCTCGCAATGGTGTCGGAACTTTCCTCCGTCCTCACCGACTTCCATATCCCCGATTTCAGTCGCCGGCTTCTCTCCCATGATGAGTTGCCGACCTGGGTCGATCCTAGAGTGAGAAGACTCCTCAGTTCTAACCGGAGAAGAATTAGGGCTGACATCATCGTCGCTAAGGATAAAACTGGCCATTACAGGACTATAAACGAAGCCTTATTACATGTTCCGAAACACAGCAATAAGACCTTTGTTATGTACATTAAAACCGGAGTTTACAACGAAAACGTTCAGGTTAACAGGTCAATGACTCACTTGATGATGATCGGCGATGGTGCTGGAAGAACCAGAATCACAGGAAACAAGAACTTCATTGACGGCACCCCGACCTTTAAAACAGCAACCGTCGCTGTTCTTGGGGACTTCTTCATAGCAAAAGACATTGGATTTGAGAACACCGCCGGCGCCGCAAAACACCAGGCCGTAGCCCTGAGAGTACAGTCGGACATGTCCATCTTTTACAGATGCTCAATGGATGGCTACCAAGACACTCTCTACACCCACACTAAGCGCCAATTCTACCGAGACTGCACCGTCTCCGGCACCATCGACTTCATCTTCGGTGACGCCTCCGCCGTGTTCCAGAACTGCACTTTTCTCGTTCGGAAGCCCATGGATAACCAGCAATGCATCGTCACCGCGCAAGGAAGAAAGGATGTTCGCCAACCATCGGCTATCATTCTCCAAAACTGCAGAATCACCTCCGATGCCGGTTATTTTCCGGTGCGGAAGCAGTTTCAAACGTATCTCGGTCGTCCGTGGAAGGAATACTCGAGGACGATAATCATGGAGACTTTCATCGACGATCTGATTCAGCCCGAAGGTTGGATGCCATGGATGGGAGATTTCGGGCTGAAAACATGCTTCTACTCAGAATACAACAACTTCGGTCCTGGATCGAACAAGTCGAAACGAGTTAAGTGGAGAGGAATCAAGAACATAACAGATCAAGCAGCGATGACTTTTACACCGGGGAGTTTCATGAAAGGAAATAAGTGGATTAAAGCTAGTGGCGTTCCTTATACTTCGGGAATGTTTTTTGTTCAAAAGAAGAAAGCAGCTTTACCATGA 1731 47.37 MADGDDSKKTKRFAIIGISSFLLVSMVVAVTVGVNINDDGSSDPVSSNKSHELSSSIKAIQAICETTDYKTDCVSSLKDSAGDTTDPKDLIQAGFKAAIKYVREAAKKSTTLEELEKDPRAAKALANCKELMDSAIVDLQQSVDKMGEFDFTKLNEMLEDLKIWLSASITYQETCLDGFENTTSSAAKKMKSALKTSMRLSSNGLAMVSELSSVLTDFHIPDFSRRLLSHDELPTWVDPRVRRLLSSNRRRIRADIIVAKDKTGHYRTINEALLHVPKHSNKTFVMYIKTGVYNENVQVNRSMTHLMMIGDGAGRTRITGNKNFIDGTPTFKTATVAVLGDFFIAKDIGFENTAGAAKHQAVALRVQSDMSIFYRCSMDGYQDTLYTHTKRQFYRDCTVSGTIDFIFGDASAVFQNCTFLVRKPMDNQQCIVTAQGRKDVRQPSAIILQNCRITSDAGYFPVRKQFQTYLGRPWKEYSRTIIMETFIDDLIQPEGWMPWMGDFGLKTCFYSEYNNFGPGSNKSKRVKWRGIKNITDQAAMTFTPGSFMKGNKWIKASGVPYTSGMFFVQKKKAALP 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6186853 6188770 + BLOR02163 Blo10g00373 65569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00373 576 Gene3D - 249 565 IPR012334 -
Blo10g00373 576 PANTHER PECTINESTERASE 14 569 - -
Blo10g00373 576 Pfam Pectinesterase 255 551 IPR000070 GO:0030599|GO:0042545
Blo10g00373 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 212 IPR035513 -
Blo10g00373 576 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Blo10g00373 576 SUPERFAMILY Pectin lyase-like 253 564 IPR011050 -
Blo10g00373 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 212 IPR035513 -
Blo10g00373 576 Pfam Plant invertase/pectin methylesterase inhibitor 59 207 IPR006501 GO:0004857
Blo10g00373 576 ProSitePatterns Pectinesterase signature 1. 280 299 IPR018040 -
Blo10g00373 576 PANTHER PECTINESTERASE 14 569 - -
Blo10g00373 576 CDD PMEI-like_3 62 213 - -
Blo10g00373 576 SMART PMEI_2 55 207 IPR006501 GO:0004857
Blo10g00373 576 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 211 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00064 Blo-Chr1:789868 Blo10g00373 Blo-Chr10:6186853 0 dispersed
Blo10g00373 Blo-Chr10:6186853 Blo17g00653 Blo-Chr17:15444902 0 dispersed
Blo10g00373 Blo-Chr10:6186853 Blo10g00374 Blo-Chr10:6201868 0 tandem
Blo10g00373 Blo-Chr10:6186853 Blo18g00629 Blo-Chr18:10397379 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00373 K01051 - csv:101207393 778.859