Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00378 ATGAACAGTATTGAAGAATCAAGAACGAGATCTCCTATCGTTCCCCTTGCAACCCTAATAGGTCGTGAGCTCAGGAAAGAGAAGGTTGAGAAACCTTTCGTGAAGTATGGACAGGCTGCTTTGGCTAAGAAAGGAGAGGATTTGTTTTTGATCAAACCTGAATGCCAAAGGATTCCTGGAAACTCGACGACATCATTTTCGGTCTTTGCGATATTTGATGGCCATAATGGCATATCAGCTGCTATATTTACAAAGGAGCATTTATTGGGTAATGTCTTGAGTGCGATTCCTCCAGGGATTGGTCGGGAGGAGTGGCTTCAAACTCTTCCCCGTGCAATGGTTGCAGGTTTTGTGAAAACAGACATAGAGTTTCAGCAGAAAGAGACATCTGGGACTACTGTCACATTTGTCATTGTTGATGGGTGGACTATTACTGTCGCATCTGTTGGAGATTCTCGGTGCATATTGGATACCCAAGGAGGTGTGGTTTCTCTTTTGACCGTTGATCACAGACTGGAAGAAAACGAAGAGGAGAGAGAAAGAGTTACTGCTAGTGGGGGTGAGGTGGGAAGGCTCAATGTTTTCGGGGGCAACGAGGTTGGTCCCCTCCGTTGCTGGCCTGGTGGATTATGTCTTTCTAGGTCTATTGGAGACACAGATGTGGGAGAATTTATTGTTCCAATACCCCACGTTAAACAAGTAAAGCTTTCAAAAGCTGGTGGACGCCTAATAATAGCTTCTGATGGAATATGGGACACATTATCTTCCGATATGGCTGCCAAGTCTTGTCGCGGTTTACCTGCAGACCTTGCTGCTAAGTTAGTTGTCAAGGAGGCTCTGAGATCAAGGGGTCTTAAGGATGATACAACTTGCCTGGTTGTTGATATTATCCCATCAGATCATTCTATTTTACCATCAACACCTAGGAAGAAGCAAAGCATATTTGATTCACTTATTTTTGGAAAGAAATCTCAGAATTCAATGACCAAACCTGGAAATAAACTCTTTGCTGTTGGAGCTGTTGAAGAATTGTTTGAAGAGGGTTCTGCCATGCTTGCAGAGAGGCTAGGTGAGGATAGAAACTCAGGAATTTTCAAGTGTGCGGTCTGCCAAGTGGATCAATCCCCAAATGAAGGCTTATCCGCAAACTCAGGTCCTTTCTTTTCACCATCGTCGAAGCCTTGGGAAGGTCCTTTTCTATGTGCCGATTGTCAAAAGAAGAAAGATGCCATGGAAGGAAAAAAGCCAAGCAAAACGAATGGATCAACGGCTTCGTCGGCGACTGGCGGACTGATCGACGGCGAGCTTCCTCCTCCCACTGTTCAGAATCGATCGACGAACGAGAGGGTCGATCGACGGACTGCGTGGCTCCTCGTCGCTTCGGAGCGACTGATCGGTGACCGACGATGA 1410 45.96 MNSIEESRTRSPIVPLATLIGRELRKEKVEKPFVKYGQAALAKKGEDLFLIKPECQRIPGNSTTSFSVFAIFDGHNGISAAIFTKEHLLGNVLSAIPPGIGREEWLQTLPRAMVAGFVKTDIEFQQKETSGTTVTFVIVDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSKAGGRLIIASDGIWDTLSSDMAAKSCRGLPADLAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHSILPSTPRKKQSIFDSLIFGKKSQNSMTKPGNKLFAVGAVEELFEEGSAMLAERLGEDRNSGIFKCAVCQVDQSPNEGLSANSGPFFSPSSKPWEGPFLCADCQKKKDAMEGKKPSKTNGSTASSATGGLIDGELPPPTVQNRSTNERVDRRTAWLLVASERLIGDRR 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6280001 6289576 - BLOR02168 Blo10g00378 65574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00378 469 PANTHER ALPHABET, ISOFORM E-RELATED 7 419 - -
Blo10g00378 469 SMART PP2C_SIG_2 51 296 IPR001932 -
Blo10g00378 469 SMART PP2C_4 23 294 IPR001932 -
Blo10g00378 469 Gene3D - 38 301 IPR036457 -
Blo10g00378 469 CDD PP2Cc 43 296 IPR001932 -
Blo10g00378 469 Pfam Protein phosphatase 2C 61 268 IPR001932 -
Blo10g00378 469 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 7 419 - -
Blo10g00378 469 SUPERFAMILY PP2C-like 43 296 IPR036457 -
Blo10g00378 469 ProSiteProfiles PPM-type phosphatase domain profile. 32 296 IPR001932 -
Blo10g00378 469 MobiDBLite consensus disorder prediction 411 449 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00378 Blo-Chr10:6280001 Blo17g00668 Blo-Chr17:17077808 0 dispersed
Blo11g00948 Blo-Chr11:20441760 Blo10g00378 Blo-Chr10:6280001 0 transposed
Blo12g00953 Blo-Chr12:27661508 Blo10g00378 Blo-Chr10:6280001 2.35E-164 transposed
Blo10g00378 Blo-Chr10:6280001 Blo18g00635 Blo-Chr18:10858196 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00378 - - tcc:18600536 719.153