Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00390 ATGAGGAAGCGTCAAGTTGTTCTTAGGAGAGAAGAAGCTTCTAGAAGCTCAACAACATCATCTTTCACAGTTAGAAATGTCAGATATGGAGAGTGCCAGAAAAACCATGCTGCCGGAGTCGGGGGATTTGCTGTCGATGGGTGCCGGGAATTCATGGCGAGCGGAGGCGAAGAGTCGAGTGGTGCACTCACTTGTGCTGCCTGTGGTTGCCACAGGAATTTCCATAGAAGGGAAGTTGAGACTGAGATAGTTTGCGATTGTTCTTCACCTTCCTCTAATGGGTCATAG 288 48.61 MRKRQVVLRREEASRSSTTSSFTVRNVRYGECQKNHAAGVGGFAVDGCREFMASGGEESSGALTCAACGCHRNFHRREVETEIVCDCSSPSSNGS 95
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6597974 6598261 - BLOR02180 Blo10g00390 65586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00390 95 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 29 78 IPR006456 -
Blo10g00390 95 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 28 79 IPR006456 -
Blo10g00390 95 MobiDBLite consensus disorder prediction 1 20 - -
Blo10g00390 95 Pfam ZF-HD protein dimerisation region 26 79 IPR006456 -
Blo10g00390 95 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 6 93 - -
Blo10g00390 95 PANTHER MINI ZINC FINGER PROTEIN 6 93 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00390 Blo-Chr10:6597974 Blo15g00309 Blo-Chr15:3512138 7.31E-32 dispersed
Blo10g00390 Blo-Chr10:6597974 Blo16g00046 Blo-Chr16:1874806 1.47E-21 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12824 PF04770 ZF-HD_dimer 9.00E-29 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00390 - - pop:7482471 159.073