Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00401 ATGGATCCCAAAGGCTCAAAGCAGCCGCAGGAAGTGATTCCCAATTTTTTGCAACCTCGCCCCCAATCTCAGCTAGAATCAGATATGGGTGAAAATAAGTCTTCCGAAATTAAGGATTTTCAGATTATAGTATCAGATAAAGAAGAGGGGAAGAAGCAATTAGCTCCAAAAAGAAGCTCAAATAAAGATAGGCACACCAAGGTAGATGGTCGAGGTAGAAGGATAAGGATGCCGGCTCTGTGCGCAGCGAGAATTTTCCAATTGACAAGAGAATTAGGGCATAAATCAGATGGGGAAACCATCCAATGGCTTTTGCAACAGGCGGAGCCGTCGATAATTGCGGCTACGGGAACCGGAACTATAGCAGCTTCTGCTTTAGCGGCGGCCGGAGTATCTGTTTCTCAGCAAGGGACCTCTTTATCAACTGGATTGCACCAAAAGATCGAAGATGATTTTGGAGGGTCAGGAAGTAGGACCAGTTGGGCTATGGTGGGTGGCAATTTGGGGAGACCACCACCCCATGTGGCTTCAGGGATATGGCCTCCTGTCAGTGGCTTTGGGTTTCAGTCATCGTCTTCACCGACAACAAATATGACACCCGAGAGTGCAAATTACCTCCAGAAGATCGGCTTCCCCGGATTTGACTTGCCAGTCGGGAATATCAGTCCGATGAGTTTCACCTCGATTCTGAGCAGCAATAGCCAGCAGCTGCCAGAGCTGGGGCTAGGGTTGTCGCCGGAAGGCCACATCGGAGTTTTGAACCCACAGGCTTTCACTCAGATTTATCAGCAGATGCGGCAGGCTAGAGTTCATCCGCAACATCACCATGCTTCTCCTAAGGATGACTCTCAAGAATTAAAGTCTGAATCTGGTTTGCCCCTCTCCTTCAATTCATACAATTCCTTAGCAGGTGCTATCTTATCCAACCAGGCAGCTTGGTTTGAGCCTTACTCTTGTTTTTTCGTCCAAAGTGGTAAAATCATATTAGTTGAAGTTAAGGATTATACTTGTCCTCAAGTATATCACATTTCAGTGGTGAAGTTAAAAGACTTTAGGACTGTCTTTGCTTTACGCCGTAGCTTTAGAGCCTGTATTGGAGTATCTCGAGCGGATAGACCATTGTTGGACTCTGCTCTTCCTTTCAGTAGCCATGTCTCTTAA 1161 46.6 MDPKGSKQPQEVIPNFLQPRPQSQLESDMGENKSSEIKDFQIIVSDKEEGKKQLAPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIAASALAAAGVSVSQQGTSLSTGLHQKIEDDFGGSGSRTSWAMVGGNLGRPPPHVASGIWPPVSGFGFQSSSSPTTNMTPESANYLQKIGFPGFDLPVGNISPMSFTSILSSNSQQLPELGLGLSPEGHIGVLNPQAFTQIYQQMRQARVHPQHHHASPKDDSQELKSESGLPLSFNSYNSLAGAILSNQAAWFEPYSCFFVQSGKIILVEVKDYTCPQVYHISVVKLKDFRTVFALRRSFRACIGVSRADRPLLDSALPFSSHVS 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 6870883 6872373 - BLOR02191 Blo10g00401 65597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00401 386 MobiDBLite consensus disorder prediction 31 71 - -
Blo10g00401 386 MobiDBLite consensus disorder prediction 11 30 - -
Blo10g00401 386 Pfam TCP family transcription factor 60 146 IPR017887 -
Blo10g00401 386 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 280 IPR005333 GO:0003700
Blo10g00401 386 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 31 280 - -
Blo10g00401 386 MobiDBLite consensus disorder prediction 269 289 - -
Blo10g00401 386 MobiDBLite consensus disorder prediction 1 71 - -
Blo10g00401 386 ProSiteProfiles TCP domain profile. 61 115 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00401 Blo-Chr10:6870883 Blo15g00307 Blo-Chr15:3443093 6.45E-39 dispersed
Blo17g00570 Blo-Chr17:10478760 Blo10g00401 Blo-Chr10:6870883 2.21E-112 transposed
Blo10g00401 Blo-Chr10:6870883 Blo11g00611 Blo-Chr11:6109106 3.36E-158 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12825 PF03634 TCP 9.10E-31 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00401 - - jre:108987051 399.053