Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00430 ATGGCTTCCGATTCTCCTGCTAACTTCAGTAATGGTGAGATTTTTGTTTTACTTTTTCCCAGACCTTCGTCGCCTGATGATTTCCTCTCCAGTCCGATAGGGAATACGTTCTCGTCTCCGGGGAGTGTCTCTCGTCCAAGAAGGCAGCGTCGATCGTCTACTCCGCTGGAATCTGGCACTCCTCCACCTCCTCAATCTCGATTTGCAAGATTGGAAACAACACCAACAGCGGCTGCATCACGTGGTCAACGAAGAGCTGGGGATCGAAGGTCCTCTGGAACAACGCCTATGGCGGCCACTCCTTCTTCTACTGATGATGTTCCACTTTCATCCGAAGGTGGCGAGGGCTACGACATGGATGAAGACCACCCCACATTTGTCTGGGGGACGAATATAAGCGTCGATGATGTTAAAGGGGCGATTATTCGTTTCTTGAAACATTTCCGGGATTCCAGAGCTTCACAATCGGAAGGAGAATTTATTACTGATGGGAAGTATACGGAGGCAATCAAACGGGTTCTTGAGATTGAAGGAGATTCTCTGGATGTTGATGCCCGTGATGTATTTGACTATGATTCCGATTTGTATACTAAGATGGTGAGGTACCCCCTTGAAGTTCTGGCAATTTTTGATATTGTTTTGATGGAAATGGTCCCCCAAATTAACCCTCTATTTGAGAAGCATATTCAAACACGGATTTACAATCTCAAAACCTCCACTTCAATGAGAAATCTCAATCCATCCGACATTGAGAGGATGGTATCACTGAAAGGAATGATTATTCGATGTAGTTCCATAATACCTGAGATTAGAGAAGGGATGTTTAGGTGTCTAGTCTGTGGGTACTACTCGGATCCCATTGCAATAGAGAGAGGACGAATCACCGAACCAACTGTTTGCTTGAAAGAAGAATGCCAAGCAAAACATTCCATGACTCTAGTTCACAATCGATGCAGATTCGCTGACAAGCAGATTGTGAGGCTTCAGGAGACTCCTGATGAGATTCCAGAAGGGGGCACACCACACACTGTGAGCTTGTTGATGCATGACAAGCTGGTTGATTCTGGAAAGCCGGGTGACAGAGTTGAGGTTACTGGGATTTACCGGGCGATGACTGTGAGAGTTGGACCTACACAGAGAACTGTGAAGTCATTATTTAAGGCGTATTGTCTTCATATAAAGAAGGCTGATAAGTCAAGAATGCAAGTGGAGGATCTTATGGAAGTAGAAAATCAGTTGGGCTCGAATGTGGATGCTCTCTCTTTTGATGAAGTGACTGTGGACAAGTTGAAAGATCTATCAAAATTACCTGACATATACAACAGGCTAACCAGATCGTTGGCCCCAAACATTTGGGAGTTAGATGATGTTAAGAAAGGCCTCCTTTGCCAGCTTTTTGGTGGGAATGCTTTAAAGTTGCCATCTGGTGCTAGTTTCCGTGGAGATATAAACGTACTTCTTGTTGGTGATCCTGGAACTAGCAAGTCTCAGCTACTCCAATACATACACAAGCTATCTCCTCGAGGCATTTACACAAGTGGAAGGGGGAGTTCTGCTGTTGGTTTGACCGCATATGTTACTAAAGATCCAGAAACGGGGGAAACGGTTCTGGAGAGTGGAGCATTGGTCTTGAGTGACAGGGGCATCTGCTGTATTGATGAATTTGATAAAATGTCTGATAATGCAAGGAGCATGTTACATGAGGTTATGGAACAGCAAACAGTTTCTATAGCTAAGGCAGGAATCATTGCCTCTCTGAATGCAAGGACCTCAGTGTTGGCTTGTGCAAATCCAAGTGGTTCACGTTACAATCCTCGTTTATCTGTGATTGACAACATACACCTTCCTCCAACTTTATTGTTTGACTTGATTTACTTAATTCTTGATAAAGCTGATGAGGATACAGATAGGCGCCTTGCGAAGCATATTGTTTCATTACATTTTGAGAATCCCGAGATTTCAGAGCAAGATTTCTTGGATCTTCCTACATTAACTGCATATGTGAGTTACGCTCGAAAGCATGTTCAGCCACAATTATCAGATGAGGCTGCGGAAGAATTAACTCGAGGTTATGTAGAGTTGAGGAGGAGAGGAAATTTCCCAGGCAGTAGTAAAAAGGTTATAACAGCTACTCCCAGGCAGATTGAAAGTTTAATACGTCTCAGTGAAGCCCTTGCCCGGATTCGTTTCTCAGAGTGGGTTGAAAAGCATGACGTAGTTGAGGCATTTCGACTTCTTGAAGTTGCAATGCAACAATCAGCAACAGATCACTCGACTGGAACAATAGATATGGATCTGATAACAACTGGAGTTTCAGCTAGTGAAAGAATGAAACGAGAAAGTGTGCTCTCCGCAACCCGCAATATTATCATGGAGAAGATGCAGCTTGGCGGCCCCTCCATGCGATTACTGGAGTTGCTGGAGGAGCTAAAGAAGCAAAGCTCCAGTAGTGAAGTCCACCTCAATGATCTGAGGACTGCAGTTGCAACTCTAGCAAGCGAGGGATTTGCAGGAATCCAAGTCTCTGTCCTGCTTAGAGAGCTTCCGTCGCAGTCGTTCTGTCGTTCGAGACTGAGCCAGTTCGCACTTCGCAGTCGTTCCATCGTTCGTCCGAGCTCTGTAGCCTCAGTGGCTGTCGTCGCGAGCCCGGGCTGGGAATCGGACTCAGTCGTCGCTGTCGTCGTCGCGAGCCCAGTCCTGCTCAGAGAGCTTCGCCTTCACGCGAGCTCTGTCCCCGTCGTCGCGAGGGGGACTCAGTCCCCTGTCCCTGACTCCCCGTCGTCGCGAGCTCAAGCTCAGGCTCGGGTAGAGGTCTGGCGGGCTGGCTCGCTGGGCCAGCCCGCCAGGCTCGAGAGCCCGGGCTCGGTGAGCTCGCGAGCCCGGGTGCTCGGGCTCTGCTCGACTCGTCTACCGGGCCCGGGCCGAGCCCGCTCGGTTACTGTAGCGGTCCGAGCCGAGCTCGGACTGCTACAGTAA 2976 47.88 MASDSPANFSNGEIFVLLFPRPSSPDDFLSSPIGNTFSSPGSVSRPRRQRRSSTPLESGTPPPPQSRFARLETTPTAAASRGQRRAGDRRSSGTTPMAATPSSTDDVPLSSEGGEGYDMDEDHPTFVWGTNISVDDVKGAIIRFLKHFRDSRASQSEGEFITDGKYTEAIKRVLEIEGDSLDVDARDVFDYDSDLYTKMVRYPLEVLAIFDIVLMEMVPQINPLFEKHIQTRIYNLKTSTSMRNLNPSDIERMVSLKGMIIRCSSIIPEIREGMFRCLVCGYYSDPIAIERGRITEPTVCLKEECQAKHSMTLVHNRCRFADKQIVRLQETPDEIPEGGTPHTVSLLMHDKLVDSGKPGDRVEVTGIYRAMTVRVGPTQRTVKSLFKAYCLHIKKADKSRMQVEDLMEVENQLGSNVDALSFDEVTVDKLKDLSKLPDIYNRLTRSLAPNIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINVLLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLFDLIYLILDKADEDTDRRLAKHIVSLHFENPEISEQDFLDLPTLTAYVSYARKHVQPQLSDEAAEELTRGYVELRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRFSEWVEKHDVVEAFRLLEVAMQQSATDHSTGTIDMDLITTGVSASERMKRESVLSATRNIIMEKMQLGGPSMRLLELLEELKKQSSSSEVHLNDLRTAVATLASEGFAGIQVSVLLRELPSQSFCRSRLSQFALRSRSIVRPSSVASVAVVASPGWESDSVVAVVVASPVLLRELRLHASSVPVVARGTQSPVPDSPSSRAQAQARVEVWRAGSLGQPARLESPGSVSSRARVLGLCSTRLPGPGRARSVTVAVRAELGLLQ 991
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 7793506 7802335 - BLOR02220 Blo10g00430 65626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00430 991 Pfam MCM AAA-lid domain 663 749 IPR041562 -
Blo10g00430 991 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 450 763 IPR027417 -
Blo10g00430 991 SMART AAA_5 481 654 IPR003593 -
Blo10g00430 991 MobiDBLite consensus disorder prediction 20 122 - -
Blo10g00430 991 PRINTS Mini-chromosome maintenance (MCM) protein family signature 568 581 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo10g00430 991 PRINTS Mini-chromosome maintenance (MCM) protein family signature 540 554 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo10g00430 991 PRINTS Mini-chromosome maintenance (MCM) protein family signature 592 604 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo10g00430 991 PRINTS Mini-chromosome maintenance (MCM) protein family signature 480 495 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo10g00430 991 ProSitePatterns MCM family signature. 548 556 IPR018525 GO:0003677|GO:0005524|GO:0006260
Blo10g00430 991 MobiDBLite consensus disorder prediction 28 56 - -
Blo10g00430 991 ProSiteProfiles MCM family domain profile. 439 643 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo10g00430 991 PANTHER DNA REPLICATION LICENSING FACTOR MCM4 93 837 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Blo10g00430 991 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 601 618 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Blo10g00430 991 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 264 277 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Blo10g00430 991 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 455 466 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Blo10g00430 991 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 315 327 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Blo10g00430 991 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 751 760 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Blo10g00430 991 Gene3D - 242 381 IPR012340 -
Blo10g00430 991 Pfam MCM N-terminal domain 140 238 IPR027925 -
Blo10g00430 991 Pfam MCM OB domain 242 371 IPR033762 -
Blo10g00430 991 Gene3D - 269 321 - -
Blo10g00430 991 Gene3D - 131 236 - -
Blo10g00430 991 MobiDBLite consensus disorder prediction 89 109 - -
Blo10g00430 991 CDD MCM4 442 749 - -
Blo10g00430 991 Pfam MCM P-loop domain 427 647 IPR001208 GO:0003677|GO:0005524|GO:0032508
Blo10g00430 991 Gene3D - 756 837 IPR036388 -
Blo10g00430 991 SMART mcm 238 751 IPR031327 GO:0003677|GO:0005524|GO:0032508
Blo10g00430 991 Gene3D - 424 755 IPR027417 -
Blo10g00430 991 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 93 837 IPR031327 GO:0003677|GO:0005524|GO:0032508
Blo10g00430 991 SUPERFAMILY Nucleic acid-binding proteins 160 388 IPR012340 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01396 Blo-Chr3:40460436 Blo10g00430 Blo-Chr10:7793506 3.20E-102 dispersed
Blo04g01396 Blo-Chr4:33570200 Blo10g00430 Blo-Chr10:7793506 6.79E-43 dispersed
Blo06g00534 Blo-Chr6:27652571 Blo10g00430 Blo-Chr10:7793506 3.63E-107 dispersed
Blo08g00626 Blo-Chr8:24697458 Blo10g00430 Blo-Chr10:7793506 4.06E-109 dispersed
Blo09g00200 Blo-Chr9:8754486 Blo10g00430 Blo-Chr10:7793506 4.03E-20 dispersed
Blo09g00553 Blo-Chr9:16812915 Blo10g00430 Blo-Chr10:7793506 8.02E-87 dispersed
Blo10g00430 Blo-Chr10:7793506 Blo14g00834 Blo-Chr14:29639199 1.24E-90 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00430 K02212 - csv:101211850 1367.83