Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00460 ATGGAACACCTTGTGGAGCATATGAGAATCTCATATCACTCAGTTCATGAACCCTCATGTGGCGTTTGCCATAAACATTGTAGATCTTTTGAGTCTCTGAGAGAACATCTCATAGGTCCACTGCCGAAACAAGAATGCAAAAACATATTCAGTGTACGAGGTTGCAAGTTCTGCTTATCCATTCTTGATAGCCCTTATGCTTTAAGGGTTCACCAAGATAGGTGTCAACTCTCTGGTGTAAACGCTGGCCTGCTTGCTCGATTTGCCAACCTTGGTATGGAGGATGGGAGAACAAAAGGGCCAGACGTCGTCGCATTGGCATGCAAAATGGTTGGTGGCGGCAGTGATTCCTCCATAGATATTTGTGCACGAGTCTGCCTCATTGATGAAAATGAAACCATACTCTTCCAATCTTATGTGAAACCAATCATCCCTATCACTAACTATAGGTATGAATCAACGGGTATTCGTGCGGAGCATTTGAGGGAAGCGATGGAACTGAGGCAAGTGCAGAAGAAAGTTCAAGACTTTCTCTGCAATGGGGAACCCATGTGGAAGATTCGACCCAGGAGTGGAAAAGCAAGGATTCTAGTGGGTCATGGTTTGGATCATGATCTTGATATTTTGCAGATAGAATATCCATCTCTAATGATCAGGGACACTGCAAAATATCCTCCATTAATGAAAACAAGCAAGCTCAGTAATTCGCTCAAGTACTTGGTTCAAGCATATCTAGGGTATGATATTCAGAATGGAATACAAGAACCGTATGAAGAGTGTGTAGCAGCCATGAGGCTTTACATAAGAATGAGGAGCCAAGCTCACAAGACAGAGAACCACCCATTTCCATCTGAGCAGCAAAATAGGAATAATTTTGCAGTGTGGAGACAGAATGAGCTGGAGAAGATGACTCCTGAACAGCTGCTCGATAATTCAAGGTCTGATTATTACTGTTGGTGCTTGGATTTGAAGGGTTAA 978 43.15 MEHLVEHMRISYHSVHEPSCGVCHKHCRSFESLREHLIGPLPKQECKNIFSVRGCKFCLSILDSPYALRVHQDRCQLSGVNAGLLARFANLGMEDGRTKGPDVVALACKMVGGGSDSSIDICARVCLIDENETILFQSYVKPIIPITNYRYESTGIRAEHLREAMELRQVQKKVQDFLCNGEPMWKIRPRSGKARILVGHGLDHDLDILQIEYPSLMIRDTAKYPPLMKTSKLSNSLKYLVQAYLGYDIQNGIQEPYEECVAAMRLYIRMRSQAHKTENHPFPSEQQNRNNFAVWRQNELEKMTPEQLLDNSRSDYYCWCLDLKG 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9452729 9454131 + BLOR02250 Blo10g00460 65656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00460 325 CDD REX4_like 104 267 IPR037431 GO:0006364|GO:0008408
Blo10g00460 325 Gene3D - 100 291 IPR036397 GO:0003676
Blo10g00460 325 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 1 322 - -
Blo10g00460 325 PANTHER OS02G0709000 PROTEIN 1 322 - -
Blo10g00460 325 Pfam Exonuclease 115 245 IPR013520 -
Blo10g00460 325 SMART exoiiiendus 102 276 IPR013520 -
Blo10g00460 325 SUPERFAMILY Ribonuclease H-like 115 272 IPR012337 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00685 Blo-Chr3:28707873 Blo10g00460 Blo-Chr10:9452729 2.89E-19 dispersed
Blo10g00460 Blo-Chr10:9452729 Blo12g01111 Blo-Chr12:28773262 4.58E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00460 - - qsu:111996861 559.296