Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00465 ATGGAGTCCCGTCGGTTCGTGTTCGACCCGCCGGCTTGCTATGGCAACATGCCGTATCTCGGAAACAGTGATTCTAGATTTCGAGGAGTGACGACGACGAGGAGCATGGAAGACGCTTCGAGAAGGAGACCTTTTTTTAGCTCGCCAGGCTATCTGTTCGATGAGGACTACTATGACGAACAGTTACCGGACAAGAACCGCCGCCTCACTCAGGAGCAGGTAATTCTTCTGGAAGAGAGCTTTGAGGCAGAAAACAAACTGGAGCCAGACCGAAAGACCCAATTAGCAAAGAAACTTGGGCTGCAGCCAAGGCAAGTTGCCGTGTGGTTTCAAAACCGCCGTGCTCGTTGGAAGACAAAGCAGCTTGAAAGGGAGTATGATGTTCTCAAATCTACATATGATTCACTTCTTTCCAATTATGACTCCATTGTCAAAGAGAACGACAAGCTCAAATTTGAGGTCGTTTCCTTATCTGACAAACTTGAAGCAAAAGAGGGGGCTGGAATTCCAATTTCGGCTAAAAAATCCGATTCTTCATGGGTAGATGTCACACCCATCTCTTCCTTCCGATTTGGCATTAAGTTGGAAGATGGGTTGAGCCCTGGAACAGGTGGAAGTGGGGTGGTGGATGAGGATGGTCTTCAACTTCTAGACAGTGGTGATTCTTATTTCCTGAGCAACGAGTACACAGTTATGGACGGGATGCATTCTGAGGAAGATGACTGTAGTGACGATAGCCAGAGTTACTACCCTGATGTCTTTCAGCAAAACCATGTGGAGGTAGAGACTCTTTGTTGGTGGGAGTGGTCATGA 813 47.6 MESRRFVFDPPACYGNMPYLGNSDSRFRGVTTTRSMEDASRRRPFFSSPGYLFDEDYYDEQLPDKNRRLTQEQVILLEESFEAENKLEPDRKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLEREYDVLKSTYDSLLSNYDSIVKENDKLKFEVVSLSDKLEAKEGAGIPISAKKSDSSWVDVTPISSFRFGIKLEDGLSPGTGGSGVVDEDGLQLLDSGDSYFLSNEYTVMDGMHSEEDDCSDDSQSYYPDVFQQNHVEVETLCWWEWS 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9674968 9676707 + BLOR02255 Blo10g00465 65661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00465 270 PRINTS Lambda-repressor HTH signature 100 116 IPR000047 GO:0003677
Blo10g00465 270 PRINTS Lambda-repressor HTH signature 91 100 IPR000047 GO:0003677
Blo10g00465 270 Pfam Homeobox associated leucine zipper 120 161 IPR003106 GO:0006355|GO:0043565
Blo10g00465 270 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 256 IPR045224 GO:0003700
Blo10g00465 270 Gene3D - 59 127 - -
Blo10g00465 270 SUPERFAMILY Homeodomain-like 55 122 IPR009057 -
Blo10g00465 270 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5 1 256 - -
Blo10g00465 270 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Blo10g00465 270 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Blo10g00465 270 SMART HOX_1 63 124 IPR001356 GO:0003677
Blo10g00465 270 CDD homeodomain 65 121 IPR001356 GO:0003677
Blo10g00465 270 Pfam Homeodomain 67 118 IPR001356 GO:0003677
Blo10g00465 270 Coils Coil 119 139 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo10g00465 Blo11g00670 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00068 Blo-Chr6:2376003 Blo10g00465 Blo-Chr10:9674968 3.10E-38 dispersed
Blo10g00465 Blo-Chr10:9674968 Blo16g01135 Blo-Chr16:39868208 5.55E-38 dispersed
Blo16g00486 Blo-Chr16:19216042 Blo10g00465 Blo-Chr10:9674968 7.74E-30 dispersed
Blo10g00465 Blo-Chr10:9674968 Blo11g00670 Blo-Chr11:7393266 5.62E-141 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12828 PF00046 Homeodomain 1.00E-16 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00465 K09338 - jre:108992866 360.147