Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00466 ATGAATAGAATAATTTCCACGCCGGCGTCTAAGTTCCGCCATCTCCGGCGACGCATCATCAACCACACCTCCTCTGCCGCTGCTGCAGCCAACGACGACGAGCATCCGCACTACCTTCTATGGCGCTACCAAATTCTCGATCCAGGCAGCGACATTGTAGCCCATTGGAACCACATTTTCCTCGTTACATGTCTCATCGCCCTCTTCATCGATCCTCTCTATTTCTATCTTCCTTCCGTTGGGGGTCCTGGCTGTCTCAAAACAGATACCAGTTTAGGAATCGCCGTCACCTTTTTCCGTACGGTGACCGATCTTTTCTACCTCCTGCATATGATTATGAAATTTCGTACGGCGTTTGTGGCTCCCAGTTCTAGGGTTTTCGGAAGGGGGGAATTGGTTATGGATGCAAGAGAAATTGCAATTCGGTACTTGAAATCAGATTTTGTGATTGATCTTGCCGCAACGCTTCCTCTCCCACAAATTGTCATCTGGTTAGTGATTCCAGCAATAAGACACTCCAGAGCTGATCATGCTAACAACACTCTGTCTCTTTTTGTTCTTATACAATATGTTCCGAGGCTGTTTCTCATCTTTCCTTTAAACCAGAGAATTATTAAAACTACTGGAGTTGTCACAAAAACAGCCTGGGCAGGAGCTGCATATAATCTCATTCTTTACATGCTTGCCAGCCATGTTTTAGGAGCTACATGGTATCTGCTTTCCATCGGTCGTCAATTCTCCTGCTGGAAATCAGAATGTGCAAAGGAGAATGCTTCCAAACTTTTGTCTTGTATCCCTAGTTTTCTAGATTGTTCTAGTTTGGAACTGCCCATAAGGCAATTTTGGCTCAACGTCACTCAAGTCACTGCGAGATGTGATCCTAAGAACGAAAATATCAAATTCAAGTTTGGAATGTTTGCGGATGCCTTCACCAATGACGTTGCCACTTCACACTTTATTGAAAAGTACCTCTACAGTCTCTGGTGGGGCTTACGGAGCTTAAGTTCGTATGGGCAAACTTTGGACACAACTACTTTCATCGGAGAGACAACATTTTGCATTTTCATATGTATTGCTGGCTTGATTCTTTTTGCACAATTGATTGGTAACATGCAGACATATTTGCAATCAATCAACGTTAGAGTTGAAGAATGGAGGGTAAAGCGAAGAGATACAGAAGAATGGATGAGGCACCGTCAGTTGCCACCAGACTTGCAAGAACGTGTTCGTCGCTTTGTCCATTACAAATGGCTTGCTGCAAGAGGAGTCAATGAAGAATCTATCCTGCAATCTTTACCTCCTGATCTTCGCCGTGAGATTCAGCGCCATTTGTGCCTCTCCCTTGTTCGCCGTGTCCCTTTCTTCTCCCAAATGGATGACCAGCTCATTGACGCCATATGTGAGCGTCTCGTCTCGTCTTTAAGTACCCAAGGGACCTACATTGTTCGAGAGGGTGATCCAGTAAACGAAATGCTATTCGTGATAAGAGGTCAGCTGGAGAGCTCCACCACTAATGGAGGTAGATCAGGATTCTTCAACTCCATCACTCTAAGACCTGGCGACTTCTGTGGAGAGGAATTGCTCACTTGGGCATTAATGCCGAGTTCAAGCTTAAACCTCCCTTCTTCTACTCGCACTGTCAAAGCTCTTTCTGAGGTTGAAGCTTTCACCCTCCATGCTGAAGACCTTAAATTTGTTGCAAGCCAGTTTAAGCGGCTGCACAGCAAGAAACTTCAGCATGCATTTAGATATTATTCCCATCAATGGAGGACATGGGGGGCTTGCTTTATACAGGCTGCTTGGAGGCGATTCCGGAAGAGGAAAATGGCCAAAGACCTAGCAAAGCGAGAGAGCCTTTCCTACTTGCTATATAACACGCCAGCTAGTTATTACGGCAATGAGGTTGGAGATGGAAGTTATGAAAATGAGGAAGATGATGATCTATCAATGGATAATTCAAACAATGCACAGCATCTTGGAGCCACCATTCTTGCTTCGAAGTTTGCTGCAAATACAAAAAGAGGGTCTCACCAGAAAGTGGAACCAGGCAATCCGGCTTCTACGAGCTTGAAGATGCCCAAGTTGTTCAAGCCAGACGAACCAGATTTCTCTCTTGACCATGAAGATGCTTAG 2133 45.15 MNRIISTPASKFRHLRRRIINHTSSAAAAANDDEHPHYLLWRYQILDPGSDIVAHWNHIFLVTCLIALFIDPLYFYLPSVGGPGCLKTDTSLGIAVTFFRTVTDLFYLLHMIMKFRTAFVAPSSRVFGRGELVMDAREIAIRYLKSDFVIDLAATLPLPQIVIWLVIPAIRHSRADHANNTLSLFVLIQYVPRLFLIFPLNQRIIKTTGVVTKTAWAGAAYNLILYMLASHVLGATWYLLSIGRQFSCWKSECAKENASKLLSCIPSFLDCSSLELPIRQFWLNVTQVTARCDPKNENIKFKFGMFADAFTNDVATSHFIEKYLYSLWWGLRSLSSYGQTLDTTTFIGETTFCIFICIAGLILFAQLIGNMQTYLQSINVRVEEWRVKRRDTEEWMRHRQLPPDLQERVRRFVHYKWLAARGVNEESILQSLPPDLRREIQRHLCLSLVRRVPFFSQMDDQLIDAICERLVSSLSTQGTYIVREGDPVNEMLFVIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPSSSLNLPSSTRTVKALSEVEAFTLHAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGACFIQAAWRRFRKRKMAKDLAKRESLSYLLYNTPASYYGNEVGDGSYENEEDDDLSMDNSNNAQHLGATILASKFAANTKRGSHQKVEPGNPASTSLKMPKLFKPDEPDFSLDHEDA 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9677810 9681294 - BLOR02256 Blo10g00466 65662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00466 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 34 705 - -
Blo10g00466 710 SUPERFAMILY Voltage-gated potassium channels 48 376 - -
Blo10g00466 710 Gene3D Helix hairpin bin 377 445 - -
Blo10g00466 710 Pfam Cyclic nucleotide-binding domain 477 564 IPR000595 -
Blo10g00466 710 ProSiteProfiles cAMP/cGMP binding motif profile. 454 584 IPR000595 -
Blo10g00466 710 Gene3D Jelly Rolls 452 572 IPR014710 -
Blo10g00466 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 34 705 - -
Blo10g00466 710 CDD CAP_ED 454 585 IPR000595 -
Blo10g00466 710 MobiDBLite consensus disorder prediction 695 710 - -
Blo10g00466 710 Pfam Ion transport protein 56 382 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo10g00466 710 MobiDBLite consensus disorder prediction 671 685 - -
Blo10g00466 710 SUPERFAMILY cAMP-binding domain-like 383 579 IPR018490 -
Blo10g00466 710 SMART cnmp_10 454 585 IPR000595 -
Blo10g00466 710 MobiDBLite consensus disorder prediction 671 710 - -
Blo10g00466 710 Gene3D - 59 376 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00466 Blo-Chr10:9677810 Blo13g00053 Blo-Chr13:779490 0 dispersed
Blo10g00466 Blo-Chr10:9677810 Blo06g01081 Blo-Chr6:34137623 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00466 K05391 - mnt:21391781 1168.68