Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00506 ATGGCGGATCTCAAAGAACGATTGCTTCCTCCTAGACCTGCATCTGCCATTAATCTTAGGGAGTCATCTCATCGGCCATCAGCAACTGCAAGACAGCCTTTTCAAGGCGTGGATGTTCCAGGATTGAAGAAACGAGGCCCAGGACTTAGATCTTGGATTCGGGTTGACCTTTCTGGGAACTCTCAAATCATTGAGGTCGATAAGTTCACCATGATGCGACGTTGTGATCTTCCTGCTCGTGATCTTCGCCTGCTTGATCCTCTTTTCGTTTATCCATCTACAATACTTGGTAGAGAGAAGGCAATTGTTGTTAATTTGGAGCAAATTCGATGCATTATCACTGCAGATGAGGTTCTGTTATTGAATTCACTTGATAGTTATGTTCTGCAATATGTGGTAGAACTCCAACGCCGACTAACAGCTCATGGGACTGGGGAGGTTTGGCAATCTCAAAGTTTAGACTTGAACTGGAGGAGTGGAAATAGACAGTTGGAGAATGTGTTTGGTAGCACATCACCTGATTATTTACCCTTTGAGTTTAGGGCTCTAGAAGTTGCTCTTGAAGCTGCTTGTACGTTTCTTGATTCTCAGGCAGCAGAATTAGAAATAGAAGCATATCCGCTGTTAGATGAACTCACATCAAAGATCAGTACATTAAATTTGGAACGTGCACGACGATTGAAAAGCAGACTCGTTGCCTTGACTCGCAGAGTTCAGAAGGTTAGGGATGAAATAGAGCAACTCATGGATGATGATGGTGACATGGCTGAAATGTATCTCACAGAGAAGAAAAGGCGGATGGAGGCTTCCTTTTATGGTGATCAGTCTTTGATGACATACAGATCAAATGATGGAGCCTCAGCCTCTGCCCCTGTTTCACCTGTATCCTCCCCTCCGGAAGCACGAAAGCTCGAGAAGAGCTTGAGTATTGCTAGAAGTCGACATGAGAGCATGAGGAGTTCAGAAAGTGCTACTGACAGTATAGAAGAGCTCGAGATGTTACTTGAAGCGTATTTTGTTGTCATTGATAGCACCTTAAATAAGTTGACATCATTGAAAGAGTACATTGACGACACAGAAGATTTCATTAACATTCAGCTGGATAATGTGAGAAATCAGCTGATCCAATTTGAGCTACTACTCACAACAGCAACATTCGTGGTTGCAATCTTCGGGGTGGTTGCCGGGATCTTCGGCATGAACTTCTCGATACCACTGTTCGACGATGAAGGAGCGTTTAAGTGGGTTCTTGTTATCACAGGAGTAACTGGTGTATGCATTTTTCTTGGATTCCTTTGGTTTTTCAAATATAGAAGACTCATGCCATTGTAG 1332 43.39 MADLKERLLPPRPASAINLRESSHRPSATARQPFQGVDVPGLKKRGPGLRSWIRVDLSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTAHGTGEVWQSQSLDLNWRSGNRQLENVFGSTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERARRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMEASFYGDQSLMTYRSNDGASASAPVSPVSSPPEARKLEKSLSIARSRHESMRSSESATDSIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFSIPLFDDEGAFKWVLVITGVTGVCIFLGFLWFFKYRRLMPL 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11257200 11259719 + BLOR02296 Blo10g00506 65702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00506 443 Pfam CorA-like Mg2+ transporter protein 333 429 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Blo10g00506 443 CDD Mrs2_Mfm1p-like 52 440 IPR039204 -
Blo10g00506 443 Gene3D Magnesium transport protein CorA, transmembrane region 381 441 - -
Blo10g00506 443 MobiDBLite consensus disorder prediction 305 323 - -
Blo10g00506 443 MobiDBLite consensus disorder prediction 15 42 - -
Blo10g00506 443 Gene3D Magnesium transport protein CorA, transmembrane region 131 374 - -
Blo10g00506 443 Gene3D - 42 123 - -
Blo10g00506 443 Coils Coil 224 251 - -
Blo10g00506 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 433 IPR045863 -
Blo10g00506 443 MobiDBLite consensus disorder prediction 283 323 - -
Blo10g00506 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 443 IPR039204 -
Blo10g00506 443 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 443 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00099 Blo-Chr1:1401419 Blo10g00506 Blo-Chr10:11257200 3.41E-118 dispersed
Blo03g00064 Blo-Chr3:2282535 Blo10g00506 Blo-Chr10:11257200 3.40E-111 dispersed
Blo03g00296 Blo-Chr3:5852341 Blo10g00506 Blo-Chr10:11257200 2.15E-99 dispersed
Blo03g01303 Blo-Chr3:39345765 Blo10g00506 Blo-Chr10:11257200 1.32E-11 dispersed
Blo10g00506 Blo-Chr10:11257200 Blo16g01085 Blo-Chr16:39382813 4.71E-152 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00506 K16075 - zju:107406935 755.362