Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00510 ATGGCTTATTCTTCGTGGATTGATACTTCTTTGAATTTGAGTGCTAAACCATCGCCTTTTATGGATGAGGCCGCGAAGGAAGTGCAAAGCAAATCATTAGATCTTGGGATGAAGATTTCTCTGAAAGAAGAGACTGGTGCTTGTGCTGTGGAAGAGGAATTGAATAGGGTGAGTGAAGAAAACAAGAAATTGACTAAAAAGCTACAAGCCATGGTGGAAAATTACAATGTATTGAGAAGCCATTTGATGGATTGTATCAACAAAAACTCTGACAAGGAACTCAGCCCGGCGAAGAAAAGAAAATCAGAAAGCAGTAACAATAACGTCAGCAATACCTTCGGAGGCGACGCAAATTCCGACACAAGCTCCTGCGAGGAGGGGTCGTGCAAGAAACCAAGAGAAGAAACGATCAAATCCAAAATAACAAAAACTTTTCACAAGACTGAACCATCTGATACAAGCCTCGTTGTGAAAGACGGGTATCAATGGAGGAAATATGGGCAAAAAGTAACCAGAGATAATCCTTGTCCTAGAGCGTATTTCAGATGCTCTTTCGCTCCTACCTGTCCGGTCAAAAAGAAGGTGCAAAGAAGTGCGGAAGATCAGTCCGTTTTGGTTGCAACTTACGAAGGAGAACACAACCATTCAAACTCTGGTCAGGAGGTGAACTCATCCTCAACTCGACGAGTCAGCGTTGGGTCAGTCCCCCTTTCGAGTTCCCACGCCCCATCAGCACCGTCCATGAATCAAGATTTCATGAAATCAAAGAGCATTAGCGAAGCGGAAGCTTTGAAATCGACAACTGATATGTCTGTAATACAGCAGTATCTGGTGGAGCGGATGGCTTCTTCTCTGACGAAAGATCCTAAATTCACTGCAGCTTTGGCCGCAGCCATGTCTGGAAGAATGTTTTCAGGACAGCGTCCTGGTTGA 933 44.27 MAYSSWIDTSLNLSAKPSPFMDEAAKEVQSKSLDLGMKISLKEETGACAVEEELNRVSEENKKLTKKLQAMVENYNVLRSHLMDCINKNSDKELSPAKKRKSESSNNNVSNTFGGDANSDTSSCEEGSCKKPREETIKSKITKTFHKTEPSDTSLVVKDGYQWRKYGQKVTRDNPCPRAYFRCSFAPTCPVKKKVQRSAEDQSVLVATYEGEHNHSNSGQEVNSSSTRRVSVGSVPLSSSHAPSAPSMNQDFMKSKSISEAEALKSTTDMSVIQQYLVERMASSLTKDPKFTAALAAAMSGRMFSGQRPG 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 11475591 11476980 - BLOR02300 Blo10g00510 65706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00510 310 Pfam WRKY DNA -binding domain 158 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo10g00510 310 MobiDBLite consensus disorder prediction 210 250 - -
Blo10g00510 310 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 304 IPR044810 GO:0003700
Blo10g00510 310 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo10g00510 310 MobiDBLite consensus disorder prediction 92 129 - -
Blo10g00510 310 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo10g00510 310 MobiDBLite consensus disorder prediction 101 125 - -
Blo10g00510 310 Coils Coil 54 74 - -
Blo10g00510 310 PANTHER TRANSCRIPTION FACTOR 1 304 - -
Blo10g00510 310 Gene3D WRKY domain 142 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo10g00510 310 SUPERFAMILY WRKY DNA-binding domain 154 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00670 Blo-Chr7:21905115 Blo10g00510 Blo-Chr10:11475591 5.52E-150 dispersed
Blo10g00510 Blo-Chr10:11475591 Blo12g01055 Blo-Chr12:28340247 1.43E-61 dispersed
Blo10g00510 Blo-Chr10:11475591 Blo02g00154 Blo-Chr2:1349466 1.09E-26 transposed
Blo10g00510 Blo-Chr10:11475591 Blo06g00896 Blo-Chr6:32172699 1.44E-26 transposed
Blo10g00510 Blo-Chr10:11475591 Blo13g00406 Blo-Chr13:23662684 6.10E-27 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12829 PF03106 WRKY 2.20E-23 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00510 - - dzi:111274387 348.977