Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00517 ATGGGTAGACCCCAGCACCGTTATCGAGGAGTTCCCCAACGCCATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCACTTCTGAAAACGAGGATATGGCTTGGAACGTTTGAAACGGCTGAGGATGCAGCAAGGGCATATGATGAAGCAGCAAGACTTATGTGTTGTCCAATGACTAGTACAAATTTCTCTCACAATCAACCAACTGATTATCTCTCTTCTCCCAAGCTTCTATCTCCAGCCCTAATAAGCAAGCTTCAAAAATGTCATATTGCCGCCCTCCAAATGACCAGAAAAATTGCACCAAAGCATCCTCAAGAACTTGAACACATCATGCAACCTCCTTTGACTGTCGCCGAAAAATATCCAGCCATATTTTCTGGACAGGCAGAGATGGATGTAAGTTGGAATGGGGAGTTGGGTCGGCGACAAAGTGGACAACCATTGGAATCTCTTGAAGATGACCAAGTAGAGCAGATGATTGAAGAGCTGCTTCATCTTGGGTCTATTGAGCTTTGTGATCCTAACAACGTTACTTCTTAA 543 45.49 MGRPQHRYRGVPQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCCPMTSTNFSHNQPTDYLSSPKLLSPALISKLQKCHIAALQMTRKIAPKHPQELEHIMQPPLTVAEKYPAIFSGQAEMDVSWNGELGRRQSGQPLESLEDDQVEQMIEELLHLGSIELCDPNNVTS 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12050628 12051392 + BLOR02307 Blo10g00517 65713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00517 180 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Blo10g00517 180 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 174 - -
Blo10g00517 180 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Blo10g00517 180 Pfam AP2 domain 7 52 IPR001471 GO:0003700|GO:0006355
Blo10g00517 180 CDD AP2 7 63 IPR001471 GO:0003700|GO:0006355
Blo10g00517 180 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Blo10g00517 180 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Blo10g00517 180 PANTHER ETHYLENE RESPONSE FACTOR 1 174 - -
Blo10g00517 180 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Blo10g00517 180 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01386 Blo-Chr1:52152465 Blo10g00517 Blo-Chr10:12050628 5.85E-12 dispersed
Blo10g00517 Blo-Chr10:12050628 Blo10g00571 Blo-Chr10:16821112 1.93E-24 dispersed
Blo12g01078 Blo-Chr12:28493030 Blo10g00517 Blo-Chr10:12050628 2.31E-13 dispersed
Blo10g00517 Blo-Chr10:12050628 Blo05g00153 Blo-Chr5:1400731 2.80E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12831 PF00847 AP2 1.20E-09 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00517 - - cit:102622603 178.333