Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00543 ATGAGTGTGTACAGCAGACATCACTTCCAATTTAGCTCCATAAATCCATTGGTAGCTTCAGCAGAGCTTCCAACCTTGCCATCCATGGGCGTGGACATGTCGAATAATCAGCCGACTTCTCGTACCAAAGACTTCTTTGCCTCTCCAGCTCTCTCTCTTAGCCTTGCGGGGATTTTCCGCGATGCCAGAGCTGCAGCTGCGGCGGCTAACATGGAGGTGGAAGAAGGAGATGAAGGGAACGGCGGAGGGCAAAGAGAAGACACTGTGGAGATTAGTAGTGAGAACTCCGGCCTTGCTAGATCGAGATCAGAGAACGAATTTGATCCGGACGGAGAGCATGATGATGAGGATGAAGATGGAGATAAGAGTAAGAAGAAGAAAAGGAAAAAGCTATTCAAAGAGTCTCCTCATCCAGATGAGAAGCAGAGGCAACAGCTGAGTAAACAATTGGGCTTGGCTCCAAGACAAGTCAAATTCTGGTTCCAAAATCGGAGAACCCAAATCAAAGCAATGCAAGAGCGCCATGAAAATACGTTGCTGAAGACAGAGATGGAGAAACTGAGAGACGAAAATAAAGCCATGAGAGAGTCAATAAACCAATCTTCTTGCCACAATTGTGGCAATGTCACTACTAGCAGAGACCCTCCCTTGACGACAGAGGAGCAACAGCTTCGACTCGAAAATACCAAACTCAAAGCTGAGGTCGAAAAACTGCGAACGACTCTGGGAAGATACCCGCCGGAGACATCACCTCTGTCGTGTGCAGCCAAAAATGACCAAGAACACCGAAGCTCGTTGGACCGCTACACTGGAATTTTCGGACTCGAGAAATTGAGAATCATGGAAATAGTCAATCAAGCAATGGATGAGCTCAAAAAGATGGCCACAGCCGGAGAACCACTTTGGATCCAAAGTGTCGAGACTGGTCGAGAAATACTAAATTACGACGAGTATATAAAAGAATTCTCTGATGTTAGCTCCAGCAATAGCCGTCCAAAGCAATGTATCGAGGCCTCCAGAGAGATGGGAATCGTGTTCCTGGACTTATCACGACTGGTGCAGAGTTTCATTGATGTGAATCAATGGAAGGAAATGTTTCCGTGGATGATCTCAAAAGCCACCATGCTCGACATTATCAGTGATGGTGAAGGCGCAAACAAGAATGGATCAGTGCAACTGATGTTTGCAGAGATACAAATGCTTACGCCAATGGTGGGTACAAGAGAAGTGTATTTTATCAGATACTGCAAGCAGCTGAGTGCTGAACAGTGGGCCATTGTTGATGTCTCCGTTGATAGAGTTGAAGATAATATTGACACTTTGTTAATGAAATGCCGAAAGCGGCCCTCCGGTTGCATCATCGAGGATAAATCAAACGGCCACTGCAAGGTGATTTGGGTGGAGCATTTAGAATGCCAGAAAAACACAGTTCATAGCATGTACCGAACGGTTGTTAACAGCGGTTCGGCCTTCGGGGCAAGGCATTGGATGGCTACGCTGCAACTCCAATGTGAACGGCTTGTTTTCTTCATGGCCACCAACGTACCCATGAAGGACTCTACAGGAGTTGGCACGCTGGCCGGGAGAAAAAGCATGCTGAAGTTGGCCCAGAGAATGACGTGTAGCTTTAGTCATGCCATTGGAGCATCAAGCTTCACTACATGGAATAAGGTTTTCAGCAAAACTGGGGAAGACATTAGAGTCGCTTCTAGAAACAACTCTAAAGACCCAGCGGAGCCTCTCGGGTTGATCTTATGTGCTGTTTCATCTGTTTGGCTTCCTGTTTCTCCTTCTGGCCTGTTTGATTTCTTAAGAGATGAAACTCACAGAAACAAGTGGGACATCATCTTCGCTGGAGGCCAAGCACAATCCATTGCCAATTTATCCAAAGGACAAGACCGTGGCAATGCAGTTGCCATTCAAACGATAAAATTGAAGGAGAGCAGCATTTGGATACTCCAAGATAGCTGCACCAATGCTTTTGAATCCATGGTTGTCTATGCTCAAGTAGACATTACAGGCATGCAATCAGTGATGACAGGTTGTGACTCCAGCAACATTGCCATGTTGCCTTCCGGTTTCTCGATTCTCCCCGATGGGCTAGAATCAAGACCCCAAGTCATTACTTCTAGGAAAGAGGAGAAGAGTTTGGAAGGAGGATCTTTGCTTACAGTAGCATTCCAAATCCTCACCAACACCTCTCCCACTGCAAAATTAACAACGGAGTCTGTTGAGTATGTCAACAATGTCATCTCATGTACTCTAAGAAATATAAAAACAAGCTTGCAGTGTGAAGATGGATGA 2304 46.01 MSVYSRHHFQFSSINPLVASAELPTLPSMGVDMSNNQPTSRTKDFFASPALSLSLAGIFRDARAAAAAANMEVEEGDEGNGGGQREDTVEISSENSGLARSRSENEFDPDGEHDDEDEDGDKSKKKKRKKLFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAMQERHENTLLKTEMEKLRDENKAMRESINQSSCHNCGNVTTSRDPPLTTEEQQLRLENTKLKAEVEKLRTTLGRYPPETSPLSCAAKNDQEHRSSLDRYTGIFGLEKLRIMEIVNQAMDELKKMATAGEPLWIQSVETGREILNYDEYIKEFSDVSSSNSRPKQCIEASREMGIVFLDLSRLVQSFIDVNQWKEMFPWMISKATMLDIISDGEGANKNGSVQLMFAEIQMLTPMVGTREVYFIRYCKQLSAEQWAIVDVSVDRVEDNIDTLLMKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKNTVHSMYRTVVNSGSAFGARHWMATLQLQCERLVFFMATNVPMKDSTGVGTLAGRKSMLKLAQRMTCSFSHAIGASSFTTWNKVFSKTGEDIRVASRNNSKDPAEPLGLILCAVSSVWLPVSPSGLFDFLRDETHRNKWDIIFAGGQAQSIANLSKGQDRGNAVAIQTIKLKESSIWILQDSCTNAFESMVVYAQVDITGMQSVMTGCDSSNIAMLPSGFSILPDGLESRPQVITSRKEEKSLEGGSLLTVAFQILTNTSPTAKLTTESVEYVNNVISCTLRNIKTSLQCEDG 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14604274 14607601 + BLOR02333 Blo10g00543 65739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00543 767 Gene3D - 281 497 IPR023393 -
Blo10g00543 767 SUPERFAMILY Homeodomain-like 129 172 IPR009057 -
Blo10g00543 767 MobiDBLite consensus disorder prediction 70 151 - -
Blo10g00543 767 Pfam START domain 283 506 IPR002913 GO:0008289
Blo10g00543 767 CDD START_ArGLABRA2_like 277 505 - -
Blo10g00543 767 Coils Coil 170 197 - -
Blo10g00543 767 ProSitePatterns 'Homeobox' domain signature. 146 169 IPR017970 GO:0000981|GO:0006355
Blo10g00543 767 ProSiteProfiles 'Homeobox' domain profile. 129 171 IPR001356 GO:0003677
Blo10g00543 767 CDD homeodomain 134 172 IPR001356 GO:0003677
Blo10g00543 767 Gene3D - 129 170 - -
Blo10g00543 767 SMART HOX_1 122 175 IPR001356 GO:0003677
Blo10g00543 767 SMART START_1 282 506 IPR002913 GO:0008289
Blo10g00543 767 SUPERFAMILY Bet v1-like 553 754 - -
Blo10g00543 767 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 44 764 - -
Blo10g00543 767 ProSiteProfiles START domain profile. 273 509 IPR002913 GO:0008289
Blo10g00543 767 Pfam Homeodomain 129 169 IPR001356 GO:0003677
Blo10g00543 767 Coils Coil 221 241 - -
Blo10g00543 767 MobiDBLite consensus disorder prediction 197 216 - -
Blo10g00543 767 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 44 764 IPR042160 -
Blo10g00543 767 MobiDBLite consensus disorder prediction 86 100 - -
Blo10g00543 767 SUPERFAMILY Bet v1-like 276 506 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00756 Blo-Chr7:24518597 Blo10g00543 Blo-Chr10:14604274 0 dispersed
Blo10g00543 Blo-Chr10:14604274 Blo01g00007 Blo-Chr1:139402 0 dispersed
Blo10g00543 Blo-Chr10:14604274 Blo02g00373 Blo-Chr2:4133203 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12834 PF01852 START 4.10E-53 CL0209 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00543 K09338 - qsu:111988083 1145.57