Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo10g00571 | ATGGTAAAATCAAAGAAGTTCAAAGGTGTCAGACAGCGTCGATGGGGCTCCTGGGTTTCTGAGATTCGTCACCCTTTACTGAAAAGGAGGGTTTGGCTAGGGACGTTTGAATCTGCAGAAGAGGCAGCCAGAGCATACGATGAGGCTGCCATATTGATGAACGGCCGGAATGCCAAAACAAACTTTCCATCAATCATAAACCAGACCGCCGGCAATGAGAGTAAATCTATATCATCTTCTCCGAATTCACCGTCCAAAATCCTCAGCGCTAAGCTTCGAAAATGCTGCAAATCTCCATCTCCTTCCCTCACTTGCCTAAGGCTTGACCTTGAGAATTCTCGAATCGGAGTGTGGCAGAAGAGTGCAGGGCCACGTTCAGATTCAAACTGGGTTATGATGGTGGAGTGTGCCGGAAAAAAAGATGAAGGAAAATTTTTACCGGAACTGATCCTTCCAAAGGCGATGCCGGAGAAGGGTTATGGGCGGCTGAATGGTGGACCTGGATCTGATGAGGAGAGGATTGCGTTGCAAATGATAGAAGAACTATTGGTAGGAATTTAG | 561 | 47.06 | MVKSKKFKGVRQRRWGSWVSEIRHPLLKRRVWLGTFESAEEAARAYDEAAILMNGRNAKTNFPSIINQTAGNESKSISSSPNSPSKILSAKLRKCCKSPSPSLTCLRLDLENSRIGVWQKSAGPRSDSNWVMMVECAGKKDEGKFLPELILPKAMPEKGYGRLNGGPGSDEERIALQMIEELLVGI | 186 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 16821112 | 16821831 | - | BLOR02361 | Blo10g00571 | 65767 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo10g00571 | 186 | SUPERFAMILY | DNA-binding domain | 6 | 63 | IPR016177 | GO:0003677 | |
Blo10g00571 | 186 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 1 | 183 | - | - | |
Blo10g00571 | 186 | CDD | AP2 | 5 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Blo10g00571 | 186 | Gene3D | AP2/ERF domain | 5 | 65 | IPR036955 | GO:0003700|GO:0006355 | |
Blo10g00571 | 186 | PRINTS | Ethylene responsive element binding protein signature | 29 | 45 | IPR001471 | GO:0003700|GO:0006355 | |
Blo10g00571 | 186 | PRINTS | Ethylene responsive element binding protein signature | 7 | 18 | IPR001471 | GO:0003700|GO:0006355 | |
Blo10g00571 | 186 | PANTHER | AP2-EREBP TRANSCRIPTION FACTOR | 1 | 183 | - | - | |
Blo10g00571 | 186 | Pfam | AP2 domain | 6 | 55 | IPR001471 | GO:0003700|GO:0006355 | |
Blo10g00571 | 186 | ProSiteProfiles | AP2/ERF domain profile. | 6 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
Blo10g00571 | 186 | SMART | rav1_2 | 6 | 69 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo05g00153 | Blo-Chr5:1400731 | Blo10g00571 | Blo-Chr10:16821112 | 1.43E-29 | dispersed | |
Blo10g00517 | Blo-Chr10:12050628 | Blo10g00571 | Blo-Chr10:16821112 | 1.93E-24 | dispersed | |
Blo10g00571 | Blo-Chr10:16821112 | Blo12g01078 | Blo-Chr12:28493030 | 3.41E-44 | dispersed | |
Blo10g00571 | Blo-Chr10:16821112 | Blo01g01386 | Blo-Chr1:52152465 | 2.16E-46 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12837 | PF00847 | AP2 | 3.40E-13 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo10g00571 | - | - | qsu:111985562 | 232.646 |