Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00571 ATGGTAAAATCAAAGAAGTTCAAAGGTGTCAGACAGCGTCGATGGGGCTCCTGGGTTTCTGAGATTCGTCACCCTTTACTGAAAAGGAGGGTTTGGCTAGGGACGTTTGAATCTGCAGAAGAGGCAGCCAGAGCATACGATGAGGCTGCCATATTGATGAACGGCCGGAATGCCAAAACAAACTTTCCATCAATCATAAACCAGACCGCCGGCAATGAGAGTAAATCTATATCATCTTCTCCGAATTCACCGTCCAAAATCCTCAGCGCTAAGCTTCGAAAATGCTGCAAATCTCCATCTCCTTCCCTCACTTGCCTAAGGCTTGACCTTGAGAATTCTCGAATCGGAGTGTGGCAGAAGAGTGCAGGGCCACGTTCAGATTCAAACTGGGTTATGATGGTGGAGTGTGCCGGAAAAAAAGATGAAGGAAAATTTTTACCGGAACTGATCCTTCCAAAGGCGATGCCGGAGAAGGGTTATGGGCGGCTGAATGGTGGACCTGGATCTGATGAGGAGAGGATTGCGTTGCAAATGATAGAAGAACTATTGGTAGGAATTTAG 561 47.06 MVKSKKFKGVRQRRWGSWVSEIRHPLLKRRVWLGTFESAEEAARAYDEAAILMNGRNAKTNFPSIINQTAGNESKSISSSPNSPSKILSAKLRKCCKSPSPSLTCLRLDLENSRIGVWQKSAGPRSDSNWVMMVECAGKKDEGKFLPELILPKAMPEKGYGRLNGGPGSDEERIALQMIEELLVGI 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 16821112 16821831 - BLOR02361 Blo10g00571 65767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00571 186 SUPERFAMILY DNA-binding domain 6 63 IPR016177 GO:0003677
Blo10g00571 186 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 183 - -
Blo10g00571 186 CDD AP2 5 63 IPR001471 GO:0003700|GO:0006355
Blo10g00571 186 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Blo10g00571 186 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Blo10g00571 186 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Blo10g00571 186 PANTHER AP2-EREBP TRANSCRIPTION FACTOR 1 183 - -
Blo10g00571 186 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Blo10g00571 186 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Blo10g00571 186 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00153 Blo-Chr5:1400731 Blo10g00571 Blo-Chr10:16821112 1.43E-29 dispersed
Blo10g00517 Blo-Chr10:12050628 Blo10g00571 Blo-Chr10:16821112 1.93E-24 dispersed
Blo10g00571 Blo-Chr10:16821112 Blo12g01078 Blo-Chr12:28493030 3.41E-44 dispersed
Blo10g00571 Blo-Chr10:16821112 Blo01g01386 Blo-Chr1:52152465 2.16E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12837 PF00847 AP2 3.40E-13 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00571 - - qsu:111985562 232.646