Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00579 ATGAAAAGGGGTTGCTTTACCTGTTACTTAGTGCATGAAAAGAAGATTGCAGCTAAGCCAAAGTGGATAACCAACAAAAGGAATTCCAAACAACCCAGTTCATCACGTTCATGCCCAGATCAGGAGGCAAATATTGCAGCACAAACTTTCACTTTCAGAGAACTGGCGGCAGCCACGATGAATTTTCGCGACGAGTGTCTGATTGGTGAAGGTGGGTTTGGAAGAGTTTACAAGGGCAGAATTGAAAGAATAGGGCAGGTGGTTGCAGTGAAGCAGCTGGACAGAAATGGACTGCAAGGGAACAAGGAGTTTCTCGTTGAGGTGTTGATGCTCAGCCTTTTACACCATCAAAACCTCGTCAATCTGATCGGATATTGCGCGGATGGAGATCAGAGACTTCTGGTCTACGAATACTTGCCTTTGGGATCTCTAGAAGATCATATTTTTGATGTTTCGACAGAAGAGAAGAAGGCATTAGATTGGACAAAAAGAATGAAGATAGCATTGGGTGCAGCAAAGGGACTGGAGTATCTACACGACAAGACAAGCCCGCCAGTGATATACAGAGACCTGAAATCATCAAACATCTTGTTAGACACAGAATTCAACGCAAAACTGTCTGATTTTGGGTTGGCAAAGCTTGGACCTGTTGGCGACAAAACCCATGTTTCTTCAAGAATAATGGGTACTTATGGGTATTGTGCTCCCGAGTATCAAAGAACAGGTCGACTCACTCTCAAGTCTGATGTCTACAGCTTTGGGGTTGTTTTGTTGGAGCTCATCTCTGGAAGAAGAGCCTTTGACACTTCAAAACCAGCTGATGAACAGAATCTAGTTTCATGGGCGCAGCCGGTTTTTAAGGAGCCAAACCGGTTCCCAAAAGAAATTGCTGATCCTCTTCTTGAAGGTGTTTTTACTTTGAAAGAATTGAATCAAGCGGTGGCGATTGCTGCCATGTGCCTTCACGAGGAACCGTCTGTGCGTCCATTGATGGGTGATGTGGTCACTGCTCTTGCTTCTCTAGGGACAGCTCCAGAGGTTGACATAGAGCTCATCACGGATATCCATTCTCCACCACCCAATCATATGAAGAAGGCAGATTCGTGGAGTGATCTCTCGGACACGATAGAAATAAGAGGAATAGAAGGAGAGTTTTGA 1158 44.91 MKRGCFTCYLVHEKKIAAKPKWITNKRNSKQPSSSRSCPDQEANIAAQTFTFRELAAATMNFRDECLIGEGGFGRVYKGRIERIGQVVAVKQLDRNGLQGNKEFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYLPLGSLEDHIFDVSTEEKKALDWTKRMKIALGAAKGLEYLHDKTSPPVIYRDLKSSNILLDTEFNAKLSDFGLAKLGPVGDKTHVSSRIMGTYGYCAPEYQRTGRLTLKSDVYSFGVVLLELISGRRAFDTSKPADEQNLVSWAQPVFKEPNRFPKEIADPLLEGVFTLKELNQAVAIAAMCLHEEPSVRPLMGDVVTALASLGTAPEVDIELITDIHSPPPNHMKKADSWSDLSDTIEIRGIEGEF 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 17375012 17376827 + BLOR02369 Blo10g00579 65775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00579 385 SUPERFAMILY Protein kinase-like (PK-like) 48 361 IPR011009 -
Blo10g00579 385 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Blo10g00579 385 Gene3D Phosphorylase Kinase; domain 1 34 138 - -
Blo10g00579 385 Pfam Protein kinase domain 65 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo10g00579 385 ProSiteProfiles Protein kinase domain profile. 62 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo10g00579 385 PANTHER RECEPTOR-LIKE KINASE LIP1 4 357 - -
Blo10g00579 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Blo10g00579 385 Gene3D Transferase(Phosphotransferase) domain 1 139 353 - -
Blo10g00579 385 SMART serkin_6 62 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo10g00579 385 PANTHER OS07G0668900 PROTEIN 4 357 - -
Blo10g00579 385 CDD STKc_IRAK 68 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00579 Blo-Chr10:17375012 Blo02g00584 Blo-Chr2:10803319 6.36E-161 dispersed
Blo12g00452 Blo-Chr12:22053100 Blo10g00579 Blo-Chr10:17375012 6.74E-14 dispersed
Blo16g00897 Blo-Chr16:36779833 Blo10g00579 Blo-Chr10:17375012 5.11E-08 transposed
Blo10g00579 Blo-Chr10:17375012 Blo06g00366 Blo-Chr6:21673337 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84492 PF00069 Pkinase 3.80E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00579 - - twl:120008030 509.22