Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00606 ATGGCTAGTTTGCCTGTTATATTAGATATTAGTTCCGATGATGAGTCTGCGCCGGACGAAATTGGAGGTATTGAACATTTGGGCTGGACTGAGCCAGAATCGAACGATGAGGATTGGTTGTCGAAGTTTTTTGGAGCGGCGGATAAGCAAGATGATGACTCCGACGAGGTTGTGGTGGTTGCCGAGTTCAACCCAACGAAGAAGATTTCCAAGTCAAAGTATTCTAAAAGGACCCTTAAAGATTCCGACGAAGATTGCGTGATTTTGGATGGTGATCCTGATAATTCCGTTGCCACCGTGAATGATTCGACCGACGGATCGGACGAGATTCTTATAGTCGGGGAAAAGGGCCAGATTGCTTGCAGAGACTACCCTCATCCAAGGCATCTTTGTGCTAGATTTCCTTTCTTCTCTACTCCACACGAGAAGCATTGTGACATGTGCCACTGTTTCGTCTGTGACACGGTTGCACCTTGTCTGTTCTGGCTCGGCGGATTATCACTTGTTGAACATTGTCATGCTACTGATAAGGACGTGATATGGAAAGAGCGGAGAATGAGTTTTAGGAAAGGAAATAAGGCTTCTATTCCAATGGCCCTACCTCCAATCATCCAAAGTCTGCAAGATGATGCTAATCCATTTACGAAGAACTCTGGTGCAGGGAGTTGTTTCTTGCCGACAAATCAAATTTCTCAATCAACAGAACTCCAGCATTGCTCCTCTAACAATATCGCTGCCTCCACTATCAGAAATCACGGGCCACACCAACAATCTGCTTCGCCCAAAAATATATTTCAGTTGAGGCAAGCATCTCATCATCAGCTTGGGGTAGACAATCATTCCATTCCAAGGGCCGTTCGGAAGTTAACTAAAAGGGATGAAGGTAATAGCTTTAGTCATTCGCCTTCTAAGTTTGTAACTTCCAACATTATGTTTAAGAGGACAGCAGCTGTAGGGGGCACCGCCCAATTCAACCGATTCCCATCATGCAGAAATAATTTTACGAATGCATCCCAATATGTCATAAATCCTCCATCTGTAGCTCCTTGCCTATCAAATGTGTTAGGTTTTGAAGATCGTAGTGGGTGGCATGATTCTCCGCCGACTGTGATTGCTGGGTCTTATTCTGAGAATGTAGCCAGAAGTGCATGTACTTCCCAAGTAGAAATTAACAGCCACTCTACTCCGCCAATAAATGGCAGCCTTCAGCATCAAAATCAAAGTGACAATTCAAATTGGAGCTCAGTTCAGGCAGAGAATCCAATTCAAAGTGCCAACCAAAATATCTATCAGCAAGGGAACCCATATCAACCTTGGCAGCAGGAGATTTTCAGTCAATTTCCCAATCATATCTCATTTCAGGATGGAAATCAAGTTCAAGATACTGCAGATGCAGCTCCAGATTTGAGATTTGATTGGTCAAGTGACTATTCTTTAAACAATCCACAGGCTCTATCTGGTGGTTGTCAAATTATAGTCGGAGAGTCCGGGCACGGCCGCTCGGCTGTTCAAGAGTCCAGTTCGGACTTAACTGGAAACTTTCATGCAACTGTAAATGTCGAACATGATAATTGTTTTATGGAAAACCAATCAGTTCGTCCGGCACAAGATTGGCTGTATGATTTAAACATTTTGTCTCCTCCGCCATCAAGGGCCGATGCAGATATGATTGCTTTCGATTTCGAAACCTCCTGGAATGGTATCGCAGAGGCGCCTTTCAGTTGGCCGATTTCCCGTTCAAATCTCGATACTTTTGGAATCTGCACTCCAATTGCACCTTGGATTCTTTCCTCTTCTATTAAACACATAAAAAAGCTCTCAATTCTCACACCAACAGGCAAAACAGCCCTCCCTCCTCCGACAGCCATGGCTTGCAGCGCTGCCGACCTCCACTCCCTCCTCGGCGGCACTGCCAATGCCACCTCCGCTGCCGCCTACATCTGCTCACAATTCGATGCCGTTTCCAGCAGGTTTATTGACACAAACTATGCCATTGATAACACCTATCTTCTCTTCTCTGCCTACCTGGTTTTCGCCATGCAGCTCGGCTTTGCCATGCTCTGTGCCGGCTCGGTTCGAGCGAAGAACACGATGAACATCATGCTGACCAACGTTCTCGACGCTGCAACTGGTGGTCTCTTCTATTATCTCTTTGGATTTGCGTTGGCTTTTGGCACTCCTTCAAATGGGTTCATTGGGCAGCACTTTTTTGGGCTGAGTAAATTTCCTTCTCCATCGTTTGACTATGGCTTCTTTCTGTATCAGTGGGCTTTTGCCATTGCAGCTGCTGGAATAACCAGCGGTTCGATTGCAGAGAGAACCCAGTTTGTTTCTTATTTGATCTATTCTTCTTTCTTGACCGGTTTGGTTTACCCTATTGTTTCCCACTGGTTCTGGTCTGCCGATGGCTGGGGAAGCCCTGCTAGAGCTGATGGTCTCTTGTTTGGCTCTGGGGTTATTGATTTTGCTGGCTCAGGTGTCGTTCACTTGGTCGGTGGCATTGCTGGCTTGTGGGGAGCCTTCATTGAGGGCCCGAGAATTGGCCGATTCAACTATGGAGGCAAGGACGTGGCTCTACGCGGCCACAGCGGCACGCTCGTCGTTCTTGGCACATTCCTTTTATGGTTCGGTTGGTATGGTTTCAACCCAGGCTCGTTCCTCAACATCGCCAAGGCTTACGGAGAAAGCGGATCGTATTACGGGCAGTGGAGTGCAATCGGAAGAACTGCAGTGACGACAACCCTCGCCGGCTGCTCAGCTGCCCTGACGACCCTCTTTGGAAAACGGTTGCTCTCTGGCCACTGGAACGGAACTGACGTGTGCAATGGCTTGCTCGGTGGGTTCGCAGCCATCACTGGTGGGTGCTCCGTGGTTGACCCATGGGCTGCAGTTCTATGTGGGTTCGTGGCAGCGTGGGTCCTTATAGGCTTCAACAAGCTAGCCGAGAAGCTCAAGTACGACGACCCGCTCGAAGCGGCTCAGCTCCACGGAGGGTGCGGAACATGGGGAATAATCTTCACCGGATTGTTTGCCAAAAAAGCTTATGTCAACGAGATATATCCAGGGCAGCCAGACAGACCTTATGGGCTGCTCATGGGCGGTGGAGGAAAGCTATTGGCTGCACACATTGTTCAGATACTGGTCATTCTAGGGTGGGTGAGCATAACAATGGGGACTCTCTTCTGGATCCTGCACAAACTGAAGCTTTTGAGAATTTCAGCTGAAGAGGAAATGGCAGGAATGGATTTGACCAGCCATGGAGGGTTTGCATACGAGCATAACGATGAGAACAAATTGGGGGACCCTTAA 3309 47.84 MASLPVILDISSDDESAPDEIGGIEHLGWTEPESNDEDWLSKFFGAADKQDDDSDEVVVVAEFNPTKKISKSKYSKRTLKDSDEDCVILDGDPDNSVATVNDSTDGSDEILIVGEKGQIACRDYPHPRHLCARFPFFSTPHEKHCDMCHCFVCDTVAPCLFWLGGLSLVEHCHATDKDVIWKERRMSFRKGNKASIPMALPPIIQSLQDDANPFTKNSGAGSCFLPTNQISQSTELQHCSSNNIAASTIRNHGPHQQSASPKNIFQLRQASHHQLGVDNHSIPRAVRKLTKRDEGNSFSHSPSKFVTSNIMFKRTAAVGGTAQFNRFPSCRNNFTNASQYVINPPSVAPCLSNVLGFEDRSGWHDSPPTVIAGSYSENVARSACTSQVEINSHSTPPINGSLQHQNQSDNSNWSSVQAENPIQSANQNIYQQGNPYQPWQQEIFSQFPNHISFQDGNQVQDTADAAPDLRFDWSSDYSLNNPQALSGGCQIIVGESGHGRSAVQESSSDLTGNFHATVNVEHDNCFMENQSVRPAQDWLYDLNILSPPPSRADADMIAFDFETSWNGIAEAPFSWPISRSNLDTFGICTPIAPWILSSSIKHIKKLSILTPTGKTALPPPTAMACSAADLHSLLGGTANATSAAAYICSQFDAVSSRFIDTNYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGLFYYLFGFALAFGTPSNGFIGQHFFGLSKFPSPSFDYGFFLYQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGLVYPIVSHWFWSADGWGSPARADGLLFGSGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFNYGGKDVALRGHSGTLVVLGTFLLWFGWYGFNPGSFLNIAKAYGESGSYYGQWSAIGRTAVTTTLAGCSAALTTLFGKRLLSGHWNGTDVCNGLLGGFAAITGGCSVVDPWAAVLCGFVAAWVLIGFNKLAEKLKYDDPLEAAQLHGGCGTWGIIFTGLFAKKAYVNEIYPGQPDRPYGLLMGGGGKLLAAHIVQILVILGWVSITMGTLFWILHKLKLLRISAEEEMAGMDLTSHGGFAYEHNDENKLGDP 1102
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 18455131 18460992 + BLOR02396 Blo10g00606 65802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00606 1102 ProSitePatterns Ammonium transporters signature. 821 846 IPR018047 GO:0008519|GO:0016020|GO:0072488
Blo10g00606 1102 MobiDBLite consensus disorder prediction 1 31 - -
Blo10g00606 1102 Pfam Ammonium Transporter Family 669 1091 IPR024041 GO:0008519|GO:0016020|GO:0072488
Blo10g00606 1102 Gene3D Ammonium transporter AmtB like domains 644 1100 IPR029020 -
Blo10g00606 1102 TIGRFAM amt: ammonium transporter 666 1091 IPR001905 GO:0008519|GO:0016020|GO:0072488
Blo10g00606 1102 PANTHER AMMONIUM TRANSPORTER 622 1098 - -
Blo10g00606 1102 SUPERFAMILY Ammonium transporter 664 1072 - -
Blo10g00606 1102 PANTHER AMMONIUM TRANSPORTER 622 1098 - -
Blo10g00606 1102 MobiDBLite consensus disorder prediction 386 416 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00606 Blo-Chr10:18455131 Blo11g00430 Blo-Chr11:3750084 0 dispersed
Blo10g00606 Blo-Chr10:18455131 Blo07g01055 Blo-Chr7:30354247 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00606 K03320 - jre:109020544 855.514