Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00627 ATGCTACTGCTAGTTTTCAACCCGTTCGGAACCGGAACTGAGACTTGGGTCCTGTTTCAGATCCGGTTCCTTGCGGTTCCGGTTTTAGTTCTTCACTCTTGGAATCGAGAACCGAATGATCTAATTGTCATGGGTATCGCTTTTTCTGGCTTTTGTGCTCTTTGGCTCTGCTTCTCTTTTTGGAGAGATCGATTTCCTTCATCTGGAACCCTTGAAAAGAAGGGTTATTCAGCAAATAAGAAGGCTTTACCAGCCAGTGAGGGCGGGAAGAAGCCAGACACAAGCAATATTGAGGAAGCTGAATCATCCTTACGCGAGAGTGGATGTTTGAACTATGAGGAAGCAAGGGCACTATTGGGTCGATACGAGTATCAGAAAGGAAATATTGAATCTGCCCTACATGTATTTGAAGGGATCGATGTTGCTGTAGTGACTCCCAAGATAAAGATAGCCATTGCTATGAGCATAGATAGAAAAAGAAGACATTCACAAAATTTTCCAATTCCACCGATATCTATACATGCTGTGAGTTTACTATTGGAAGCCATATTTCTCAAAGCAAAATCATCATTGCAGGGCCTCGGGAGGTACAAAGATATTGGTTTATTGATAATCACAGAGACTGAGCCGGTAGTTGATCTAATAGTAGGGCAAAAAAAGTTGATCAAGAGCACAAGATCAAATCATAAACCTGGTGCTAATTTGTATTACCAAGAGACTCTTAACAATGCTGTCGAATTGCTTCCAGAGTTATGGAAACTGTCTGATTTCCCCTGCAAAGCAATATTGTCATTTCGACGGGCACTTCTTTACCACTGGAATCTCGATGTAGAAACTACTACAAGGATTCAAATGGAGTTTGCCATTTTTCTTCTCTACAGCGGAGGTGAAGCCAGGCCCCCAAATCTCGGGTGGCAAATGGAGAGTTCATTTGTACCCAAGAACAATATAGAGGAGGCTATACTCCTACTTATGATATTATTAAGAAACGTTAATCTTAAAAAGATTGATTGGGATCCATCAATCTTGGATCACCTCTCATTTGCTCTATCAATATCAGGGGATACTAGAGCTTTAGCGAGTCTCGTTGAGGAATTACTTCCGGGAATTATTGATCGCAAAGAAGTGTATTACACACTAGCTCTCTGTTATTATGGAGCGGATGATGACTATACTGCGTTAAATTTGCTGGGGAAGTTGTTGAGTAGAAGCGAGGATCCAAATTGTCTTCCAGCTTTACTAATGGCATCAAAAATTTGTGTAGAAACTCAAAATCTTGCAAAAGAAATGTTAAGTTTTTCTCGTACAGCACTTCAAAACTTGGATGGTGGATGCGATCAGTTGGCAAGTGTTGCCAATTGTTTGTTGGGTATTTCACTTTCTGCTTGCTCAAAATCAGCCATGGCAGATTCTGAGAGGGCCATCAAACAAGCTGAAGCCCTGCAAGTCCTAGAAACAGCTGGGAAGATGACAAAAATGGGCGACCCTTTTGTTCTTTTCGAGTTGAGTCTTCAAAATGCAAAACAAAGGAGATTAGATTCTGCAGTTTATTATGCTAAACACTTGCTTAGACTGGAAGGTGGCTCTAATGTCAAATGGTGGCAGTTACTTGCGAGAATTCTGTCTGCTCAGAGAAGATTTTTCGAAGGAGAAAGTATTATAAGTGCTGCTTTGGATCAGACGGGGAGATGGGATCAAGGAGAACTACTTGGGACAAAAGCTAAGCTTTTGCTTGCACAAGGCAAGATAAAGAGTGCCATCGATACATATACTCAATTGCTTGCTCTTCTTCAAGTTCAGAGAAAAAGCCTTGGCTTGGGGATGGCATTTCTTAAGGAACTTGAGCTAGAGCTTGAACTTGAACTTGAACTTGAGCTTGAGCTAAGACTTGTGCTTGGGCTTGAGCCTGGGCTTGAGCTTAAGCTTGGGTTTGGGCTTAAGCTTGGGCATGGGCTTGGACTTGAGCCTGAGTTTGGGCTTGAGCTTGAGCCGTAG 1995 42.11 MLLLVFNPFGTGTETWVLFQIRFLAVPVLVLHSWNREPNDLIVMGIAFSGFCALWLCFSFWRDRFPSSGTLEKKGYSANKKALPASEGGKKPDTSNIEEAESSLRESGCLNYEEARALLGRYEYQKGNIESALHVFEGIDVAVVTPKIKIAIAMSIDRKRRHSQNFPIPPISIHAVSLLLEAIFLKAKSSLQGLGRYKDIGLLIITETEPVVDLIVGQKKLIKSTRSNHKPGANLYYQETLNNAVELLPELWKLSDFPCKAILSFRRALLYHWNLDVETTTRIQMEFAIFLLYSGGEARPPNLGWQMESSFVPKNNIEEAILLLMILLRNVNLKKIDWDPSILDHLSFALSISGDTRALASLVEELLPGIIDRKEVYYTLALCYYGADDDYTALNLLGKLLSRSEDPNCLPALLMASKICVETQNLAKEMLSFSRTALQNLDGGCDQLASVANCLLGISLSACSKSAMADSERAIKQAEALQVLETAGKMTKMGDPFVLFELSLQNAKQRRLDSAVYYAKHLLRLEGGSNVKWWQLLARILSAQRRFFEGESIISAALDQTGRWDQGELLGTKAKLLLAQGKIKSAIDTYTQLLALLQVQRKSLGLGMAFLKELELELELELELELELRLVLGLEPGLELKLGFGLKLGHGLGLEPEFGLELEP 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19434670 19451783 + BLOR02417 Blo10g00627 65823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00627 664 Gene3D Tetratricopeptide repeat domain 232 602 IPR011990 GO:0005515
Blo10g00627 664 SUPERFAMILY TPR-like 373 598 IPR011990 GO:0005515
Blo10g00627 664 PANTHER PROTEIN NPGR2 64 626 - -
Blo10g00627 664 MobiDBLite consensus disorder prediction 82 102 - -
Blo10g00627 664 PANTHER PROTEIN NPG1 64 626 IPR043376 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00760 Blo-Chr2:25294900 Blo10g00627 Blo-Chr10:19434670 0 dispersed
Blo10g00627 Blo-Chr10:19434670 Blo19g00094 Blo-Chr19:2436350 3.36E-134 dispersed
Blo17g00559 Blo-Chr17:9995569 Blo10g00627 Blo-Chr10:19434670 3.11E-07 transposed
Blo10g00627 Blo-Chr10:19434670 Blo07g00276 Blo-Chr7:3252829 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00627 K21843 - jre:108995987 672.544