Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00644 ATGGATTTGGAATTCCCGCCGGAATCTCTGTTCGGCCCGCCGGAATCATTTTCCTTGAAAGAGCTCTTCGATCCCCAAAACTCTCTCCCGTTCAACATGGACGACTCAGAGGAAATGATCCTGTACGAAGCAGTTGCAGAGGGAATAAAGCTAGAAGTTTCAGAAAGCAGCTCTTGCGGCGCGATTAAGGAAGAGGAAGCGAGCTCCTGCTCTGAAAAAGTAGGACAGCCGTTAAAGATAAAGTCGTACAGAGGGGTGAGGAGGAGGCCATGGGGGAAGTACGCTGCAGAAATAAGAGACTCAACCAGGCAAGGGATAAGGGTATGGCTGGGGACATTCGATAGTCCAGAGGCAGCTGCCTTGGCCTACGATCAAGCTGCATTTTCAATGAGAGGTTCAACGGCGGTTTTGAATTTCCCTATTGAAAAGGTGAGACAGTCTCTCAAAGAAATCGAATACGGAATTGAAGATGGCTGGTCTCCTGTTATTGCTCTGAAGAGAAAGCATTCAATGAGGAAGAAGGTTGGTTCTAGGAAGAGCAAAAAAATGGCGGAGAAGAGGAAGAAGAGCGTAGTGGTTTTAGAAGACTTGGGGAGTGAATATTTAGAGCAGCTTTTGAGTTGTTCTTCAGATACTCCAAATTCTTTGTGA 651 46.7 MDLEFPPESLFGPPESFSLKELFDPQNSLPFNMDDSEEMILYEAVAEGIKLEVSESSSCGAIKEEEASSCSEKVGQPLKIKSYRGVRRRPWGKYAAEIRDSTRQGIRVWLGTFDSPEAAALAYDQAAFSMRGSTAVLNFPIEKVRQSLKEIEYGIEDGWSPVIALKRKHSMRKKVGSRKSKKMAEKRKKSVVVLEDLGSEYLEQLLSCSSDTPNSL 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 20106488 20107138 - BLOR02434 Blo10g00644 65840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00644 216 CDD AP2 81 141 IPR001471 GO:0003700|GO:0006355
Blo10g00644 216 Gene3D AP2/ERF domain 81 142 IPR036955 GO:0003700|GO:0006355
Blo10g00644 216 SMART rav1_2 82 146 IPR001471 GO:0003700|GO:0006355
Blo10g00644 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 21 208 - -
Blo10g00644 216 ProSiteProfiles AP2/ERF domain profile. 82 140 IPR001471 GO:0003700|GO:0006355
Blo10g00644 216 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Blo10g00644 216 PRINTS Ethylene responsive element binding protein signature 122 142 IPR001471 GO:0003700|GO:0006355
Blo10g00644 216 PANTHER DNA-BINDING DOMAIN 21 208 IPR044808 GO:0003700|GO:0009873
Blo10g00644 216 Pfam AP2 domain 82 132 IPR001471 GO:0003700|GO:0006355
Blo10g00644 216 SUPERFAMILY DNA-binding domain 82 141 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00405 Blo-Chr6:23378165 Blo10g00644 Blo-Chr10:20106488 7.41E-58 dispersed
Blo10g00321 Blo-Chr10:4858049 Blo10g00644 Blo-Chr10:20106488 2.76E-54 dispersed
Blo10g00644 Blo-Chr10:20106488 Blo11g00448 Blo-Chr11:3962976 1.10E-55 dispersed
Blo02g00736 Blo-Chr2:23863779 Blo10g00644 Blo-Chr10:20106488 3.95E-62 transposed
Blo10g00644 Blo-Chr10:20106488 Blo07g01031 Blo-Chr7:30140539 4.76E-103 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12842 PF00847 AP2 3.70E-15 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00644 K14516 - pop:7454341 251.906