Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00679 ATGGCGGATGAGGTGGTTATTTTGGACTTCTTGCCCAGCCCTTTTGGGATGAGGTTGAGGATTGCTTTGGCTGAGAAGGGGATCGAGTATGAGTATAAGGAGGAGGATCTGAGGAACAAGAGCCCTCTTCTTCTTCAGATGAACCCGGTTCACAAGAAGATTCCGGTCCTCATTCACAATGGGAAGCCTGTTTGTGAATCCCTGATTGCTGTCCAATATATTGACGAGGTTTGGCCGGAGAAGTCTCCATTGTTTCCGGCGGATCCTTTTCTCAGATCTCAGGCCAGATTCTGGGCTGACTATGTGGACAAGAAGATATATGAGCTGGGGAGGAAGCTATGGACGACAAAAGGAGAAGAACAAGAAACGGCAAAGGCTCAATATCTAGAGTGCTTGAAGACACTCGAAACGGAGCTAGGAGACAAACCCTTCTTCGGAGGGGAGAGTTTTGGGTATGTCGACGTGGCATTCATTCCGTTCTACTCGTGGTTTTTGGCCTATGAGACGTATGGGAAGTTCAGGACGGAGGAAGAGTGTCCTAAACTCATCGCTTGGGCCAAAAGATGCTTGGAGAAGGAGAGTGTTTCAAAGTCTCTTCCTGATCAGGAGAAGGTTCTTGGCTTTGTTTCTCAATTGAGAAAGTCATTTGGGATAGAGTAG 660 47.58 MADEVVILDFLPSPFGMRLRIALAEKGIEYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKPVCESLIAVQYIDEVWPEKSPLFPADPFLRSQARFWADYVDKKIYELGRKLWTTKGEEQETAKAQYLECLKTLETELGDKPFFGGESFGYVDVAFIPFYSWFLAYETYGKFRTEEECPKLIAWAKRCLEKESVSKSLPDQEKVLGFVSQLRKSFGIE 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 21784355 21785708 + BLOR02469 Blo10g00679 65875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00679 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Blo10g00679 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 212 - -
Blo10g00679 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Blo10g00679 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Blo10g00679 219 CDD GST_N_Tau 5 78 - -
Blo10g00679 219 Pfam Glutathione S-transferase, C-terminal domain 124 188 - -
Blo10g00679 219 Gene3D Glutaredoxin 1 87 - -
Blo10g00679 219 Gene3D - 88 219 - -
Blo10g00679 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Blo10g00679 219 Pfam Glutathione S-transferase, N-terminal domain 8 76 IPR004045 -
Blo10g00679 219 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Blo10g00679 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Blo10g00679 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Blo10g00679 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 212 IPR045073 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00972 Blo-Chr7:29185603 Blo10g00679 Blo-Chr10:21784355 3.84E-126 dispersed
Blo10g00679 Blo-Chr10:21784355 Blo10g00702 Blo-Chr10:22466544 2.83E-149 dispersed
Blo10g00697 Blo-Chr10:22337960 Blo10g00679 Blo-Chr10:21784355 2.53E-104 dispersed
Blo10g00710 Blo-Chr10:22700971 Blo10g00679 Blo-Chr10:21784355 1.11E-122 dispersed
Blo19g00149 Blo-Chr19:5556318 Blo10g00679 Blo-Chr10:21784355 1.86E-50 dispersed
Blo10g00679 Blo-Chr10:21784355 Blo10g00680 Blo-Chr10:21788668 4.03E-149 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00679 K00799 - tcc:18594547 369.777