Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00713 ATGGATTTAATGGAGGTTTCGTTAATGTACCACGTGGCTGCTGTGCTGCTGTTTCTGTGGTTTCTTTCTGCGATCAACTTCTACCATATTTCGTTTTACTTGCTCTCTCTCATGTACCTCTACTTGGTTCATGAAAGATACGTGATGAGATTGAAGAAGGAATTGCAGTATAGAGAGAGAAAACACAGCAATCACAGAAGGGTACTTTCTGAATCGGAAACTGTGAGATGGATGAACTATGCTGTAGAAAAGTTATGGCCTATTTGCATTGAACAGATTGCTTCCCAGAAGATTCTCCTCCCCATCATTCCCTGGTTCTTGGACAAGTACAAGCCTTGGACTGCTAAAAAGGCTGTGGTGGAGCATCTTTACTTGGGAAGAAATGCTCCTATGTTCACCGAAATTAAAGTTCATCACCGATCGTTGGAGGACGATCACTTGGTGTTGGAGCTGGGGATGAATTTTTTGACAGCTGATGATATGAGCACAATTCTTGCAGTGAAGTTAAGGAAAGCGTTAGGATTTGGGTGGTGGACAAAGCTGCATCTCACAAGCCTCCACATAGAAGGAAAGATTTTGATCGGTGTGAAGTTCATTCGGAGTTGGCCGTTTCTTAGCCGTCTTCGGCTATGCTTTGCCGAGCCTCCGTTTTTTCAGATGTCTGCTCGGCCTCTCTATTCTCATGGACCTGATGTTGCTGCACTTCCTGGCATTGCAGACTGGCTGGCTACTTATTTATGTGTTAATCTTGGTCAGGACAAGCTTCTTTCCACTGCCTTTGAGCAGACACTCGTTGAGCCGAATTTGTTGGTCGTCGATATGGAGAAGTTCACTTCACCTCAGCCCGATCACTGGTTCTCCGTCGAAGTAGTGGAGCCGGTAGCTCATGTCAAAGTTGAAGTTCTCGAAGGATCCGATATGAAACCCTCCGATATTATCAATGGATTGGCGGATCCATTCGTGAAAGGTCAATTGGGTGCTTATCGATTCAAGACGAAGACAGAACGAAAAACGTTGACTCCGAAGTGGATGGAGGAATTCAAGATTCCCATTGTTTCATGGGAATCAAAGAATGTGATCACCATTCAAGTTTATGACAAGGATAATGTCGTCGATGATTACCTAGGAGACTGTTCCATTGATGTCGCTGATTTCAGAGATGGAAGGAGACATGACCTGTGGTTGGCTCTTCAGAATGTCAACACTGGAAGGCTACGCATTGCAGTTACTGTTGAAGAAAATATCAAGGTTTTGGAATTACCCTTTTTCAAAGTTTCTTTTCTTCCAGATGATCATCGCAGTGAGCAGGAGGAAGCTGTTAATGGAGGTTCACTTTCATCTGCACTTTCTGATGAGTCTCCTGTCGATAATTTCGAGGCGATTCATGTCGAAGGGCAAAAGGAGACCGGAGTTTGGATCCATCATCCCGGAAGTGAAGTTTCTCAAACGTGGGAGCAGAGGAAAGGGAAGGGTCGTCGAATGGAGGTGGAAATTCAAGGCCATCAATCCAAACAGCCGTCGAAATCGCCTGTAGGGGGATTTTTCGCTGCAATATTTCACCATAATTCCAAAAAAGATGATCAAACCGGCGGCTTAGGGAAGGCCGTCTCATCTCCGCACCCAAATGTTCGGGCAACTAACAAGACGGAGGTAGGCGTAAAGCTCGTCGCCCATGGCGAAAATTCTCCCCAGGCTTCTGAAATTTCCAAGACAGAAGTGAAAACAGTAACAAAAGTGGTTGAAGATCATAAGAAATCAGATTTATATCAAATCGAAGAGGAAGAAAGAGAAGTACCGATCGAATCAGATTCCTCCGAGGATGATGAATCGCTCACGCGAGTGATTGCTTCTCCAGTAACCTGTGGAGTATCAGCCGATGATTCAGAAGGAAATCGAAAGCTGGAAAAGATCGAAGAGCACGGAGACGAATCGAAGGAAGATGTTCATAAAAACAAGATCGATGAACGGAAAAAGAAAGAATAG 1983 44.63 MDLMEVSLMYHVAAVLLFLWFLSAINFYHISFYLLSLMYLYLVHERYVMRLKKELQYRERKHSNHRRVLSESETVRWMNYAVEKLWPICIEQIASQKILLPIIPWFLDKYKPWTAKKAVVEHLYLGRNAPMFTEIKVHHRSLEDDHLVLELGMNFLTADDMSTILAVKLRKALGFGWWTKLHLTSLHIEGKILIGVKFIRSWPFLSRLRLCFAEPPFFQMSARPLYSHGPDVAALPGIADWLATYLCVNLGQDKLLSTAFEQTLVEPNLLVVDMEKFTSPQPDHWFSVEVVEPVAHVKVEVLEGSDMKPSDIINGLADPFVKGQLGAYRFKTKTERKTLTPKWMEEFKIPIVSWESKNVITIQVYDKDNVVDDYLGDCSIDVADFRDGRRHDLWLALQNVNTGRLRIAVTVEENIKVLELPFFKVSFLPDDHRSEQEEAVNGGSLSSALSDESPVDNFEAIHVEGQKETGVWIHHPGSEVSQTWEQRKGKGRRMEVEIQGHQSKQPSKSPVGGFFAAIFHHNSKKDDQTGGLGKAVSSPHPNVRATNKTEVGVKLVAHGENSPQASEISKTEVKTVTKVVEDHKKSDLYQIEEEEREVPIESDSSEDDESLTRVIASPVTCGVSADDSEGNRKLEKIEEHGDESKEDVHKNKIDERKKKE 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 22726028 22730210 - BLOR02503 Blo10g00713 65909

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00713 660 CDD C2 297 397 - -
Blo10g00713 660 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 4 559 - -
Blo10g00713 660 SMART C2_3c 296 394 IPR000008 -
Blo10g00713 660 Pfam C2 domain 296 396 IPR000008 -
Blo10g00713 660 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 4 559 - -
Blo10g00713 660 MobiDBLite consensus disorder prediction 592 660 - -
Blo10g00713 660 MobiDBLite consensus disorder prediction 628 660 - -
Blo10g00713 660 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 275 IPR031468 GO:0008289
Blo10g00713 660 MobiDBLite consensus disorder prediction 525 547 - -
Blo10g00713 660 Gene3D C2 domain 282 413 IPR035892 -
Blo10g00713 660 ProSiteProfiles C2 domain profile. 280 395 IPR000008 -
Blo10g00713 660 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 295 410 IPR035892 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00713 - - - jre:108995977 702.205
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo03g00728 Blo10g00713 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00713 Blo-Chr10:22726028 Blo19g00065 Blo-Chr19:1613476 0 dispersed
Blo10g00706 Blo-Chr10:22568544 Blo10g00713 Blo-Chr10:22726028 2.33E-81 proximal
Blo10g00713 Blo-Chr10:22726028 Blo03g00728 Blo-Chr3:30579878 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g874 Blo03g00728 . . . . . . . . . . . . . . . . Bhi09g03594 . . . Hepe01g1487 . . . . . . . . . Cone6ag0227 Cone9ag0260 . . Lsi04g01952 . . . . Blo10g00713 . Bda12g00801 . . Bma07g01119 . . . Cmo09g00683 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004301 1 2 4 3 2 0 2 1 0 1 1 1 2 1 1 2 1 3 1 1 1 1 1 1 1 1 1 2 1 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo10g00713 Blo_Chr10 FPKM 34.348785 35.551373 6.106961 6.311582 9.591463 8.572063 9.173068 21.590366 21.88398 23.417398