Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00716 ATGGCGTCGAGGAGTGTTGCACCATCTATTGTTGAAGAATCCATTAACTACGGAATGGAGGTGGATCCTATTTTGGTAGTCAAGGTTGATAAGCAACGTGCGTTCTATCACGAACTTGGTATAGAGGTGCATTCAATCTTGGCATCTCTAGACTCAGAGCTTCGTTCAATACGGGACTCAGAAGATGATGATTGGGCAGAGAATATGTATCTTCAACTAGAATGTTCGTCCTCAGAGCTTTGTCTGGGGAAGAAGTATAGTTCGTTGAACAAAATTAGAGAAGAAGTGGTTGATTATGCTTTGAAGAATGGGCACATGATAAAGTTCATCAAAAGAGAATGTTATCCGTGGCAGTTTGAGGTGGGTCTCATTGTTCTTCCGAAGAGGTGCGAAAAGTTAATCCCTTTCGGCAGTTCTTGTTTAAAGATCATGAATAATGAGTTCGCCCAAATCGGGACATACTCGCTGCTCAAGGATCTTAGACTCGAATTGGATGGGGAAGACGAAACTTTTGATGTCTGCTTTTGGGTTTATCTCAAAAGTTGTGATACCTTTCCTGCTACAATACTTAATCAGGTTTCCTCAAATGGAACAGATGCCATTCCTTTTATCATTTTAAATGAAAAGCAGCAATTAGTTGTTTTGCTATTTCATAACATGACCAATAAAGCTCCTGATCTTGGCACTCCCTCTTCCTGGACTGAAGTTCCACATGTGGTGATGGAGAGTGAGTTTCCTCAAGAAGAATGGGTTCATTTGGGGTTACAGATATCTACCACCTTCACGAGGCTGTTCATTAATGGGGACTCTGTGGGAGAGTTGTCGTCGGTCTCAGTTGAAGAACACAAACCGACTACCATGGGGAAGATTTTTCTGGTTGGTGGAAAAGACGAGAAGAGTGTGGAGGGGTATGTTCACAATGCAGAAGTCTTTCCCCCCAAAATGAGATCAATCAAGAGACATTATCATAAGGATCCACCTATTCGATTATCTATTGACAACTCCTCTACCTCCGAGATTGAAGTAGGCAACTATGGTGTGTGGAGTATTGTTGGTGGCAAGGCATCTTGTCGTAGAAACTTTTCATTGGATGTTATTTTGACAGATTTCTCTGGACATCCTGTGTTAAAGGAAATGGAGGTTTTTGCTTCCCTTATCTATTCGGACAACGGAAAACCTGTGGAGAAGACAAGCGATCAAGAGCCTCCCCTTTATGCAACCTATGACGGAACCGAATTTCCTTCTTGTGATCGACCGGGTAAACTTTTGCATGGGAGAGCATCCTTTAAGCTGAAGATAGCCCAGCTTTCGTCCAAGTGCGATAATAGGTTATTTTGTATTAGATTTCACGCACCTGAAGATGGAAGTTATTCCTTCCATGAAGTAGTATCCGCTCCAATTCGTTGTGTTTCCCGGAGTAGGAATACACGTGTATCGCCGTTATGGAAAAATTTAGCAACTCCCATCAACCCCGTTGAAAAATTGACCACTTCTGCCAATTCTTTGGATATATCTCCATTGCAGAAGAAACTAAGAACTTCAGAACTTACTAAATCTCCGTTGTTGAAGAAACTAACATCTCCAACCAATTTGGCTGATAAATCTCCAGTGCAGAAGAAATTAAGAGCCACTGCCGATGGATATGACAAATCTCCGATCGGGAAGAAATTAACACAAATTTATCGTAAAGGTAGGCAGAGAAAAGATACGAGTCCATCGATGAGGCCCGATAGATTAGAACAAGTTAGAATTTCTGCAACCTCAAGTGACTCGCCGAGTGTAGAGCGACCCGATGAAGAATGCACCTCCCATGTCTTAAATTTCAATCAGGTGGAAAATGTATCTGAGCCAAGTTTGGAAGGGGGAACAGAGGACAGTGAAGAAGAAGATGACTCCCCGTCTGTTTCGGGAAGCAATGAGCGTAGAACTTCAGATTTCAAATCAACGTCAAATAGGCTAAATCTAATCTCGGATGCTAGCATTTTCAAATACTGCCTAGCAGATGTAGCTGAGAGGTCAGTCGTGCTCAGGGAGATAGCGACCACTCTTTCAGATGAAGATGTTTTTGAATTTGCAGCTCAGATTGCCCTCTATTCAGGTTGCTCACACCACAGGGGCCAAATTTTAATGGCAAAAGGATTGATTGAGGAAGGAACACAAGTTTGGAATTCATTGTCACAAAACAATGACCATGTTCTTTGGGACAGTTTGGTTTTCCATATCCAAGAGCAATTTATGCGAATATCTCAGTGCAGCTCTCGATCTCTTACGGAGCAGGACTTTGAGACCTTGAGAACTATTGCTGGTTGCCAGAAGTATATGGCCATAGACAACTTTGAGAGGATGTGGTGTTGGCTATACCCAGTAGCTTTTGCATTGTCAGGAGAATGGTTGAATTCAATGTGGAGTTCAACATCACCCAAGTGGATTGAAGGTTTCATCACGAAAGAGGAGGCGGAATCTGCCCTCCGAGGTCCGAGGGGCCCACAAGAGCCGGGCTCTTTTATTCTCCGTTTTCCGACTTCTCGAAGCTGGCCCCACCCTGATGCCGGTAATTTGGTTGTCACTTACGTTGGCACTGACTACTCCCTTCATCATCGGCTACTTTCCTTGGATTACAAGTACATGTGCTAA 2634 43.13 MASRSVAPSIVEESINYGMEVDPILVVKVDKQRAFYHELGIEVHSILASLDSELRSIRDSEDDDWAENMYLQLECSSSELCLGKKYSSLNKIREEVVDYALKNGHMIKFIKRECYPWQFEVGLIVLPKRCEKLIPFGSSCLKIMNNEFAQIGTYSLLKDLRLELDGEDETFDVCFWVYLKSCDTFPATILNQVSSNGTDAIPFIILNEKQQLVVLLFHNMTNKAPDLGTPSSWTEVPHVVMESEFPQEEWVHLGLQISTTFTRLFINGDSVGELSSVSVEEHKPTTMGKIFLVGGKDEKSVEGYVHNAEVFPPKMRSIKRHYHKDPPIRLSIDNSSTSEIEVGNYGVWSIVGGKASCRRNFSLDVILTDFSGHPVLKEMEVFASLIYSDNGKPVEKTSDQEPPLYATYDGTEFPSCDRPGKLLHGRASFKLKIAQLSSKCDNRLFCIRFHAPEDGSYSFHEVVSAPIRCVSRSRNTRVSPLWKNLATPINPVEKLTTSANSLDISPLQKKLRTSELTKSPLLKKLTSPTNLADKSPVQKKLRATADGYDKSPIGKKLTQIYRKGRQRKDTSPSMRPDRLEQVRISATSSDSPSVERPDEECTSHVLNFNQVENVSEPSLEGGTEDSEEEDDSPSVSGSNERRTSDFKSTSNRLNLISDASIFKYCLADVAERSVVLREIATTLSDEDVFEFAAQIALYSGCSHHRGQILMAKGLIEEGTQVWNSLSQNNDHVLWDSLVFHIQEQFMRISQCSSRSLTEQDFETLRTIAGCQKYMAIDNFERMWCWLYPVAFALSGEWLNSMWSSTSPKWIEGFITKEEAESALRGPRGPQEPGSFILRFPTSRSWPHPDAGNLVVTYVGTDYSLHHRLLSLDYKYMC 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 22751686 22758549 - BLOR02506 Blo10g00716 65912

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00716 877 PANTHER SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR 151 875 - -
Blo10g00716 877 MobiDBLite consensus disorder prediction 603 620 - -
Blo10g00716 877 Gene3D SH2 domain 796 875 IPR036860 -
Blo10g00716 877 SUPERFAMILY SH2 domain 803 875 IPR036860 -
Blo10g00716 877 SUPERFAMILY Concanavalin A-like lectins/glucanases 168 297 IPR013320 -
Blo10g00716 877 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 151 875 IPR001217 GO:0003700|GO:0006355|GO:0007165
Blo10g00716 877 ProSiteProfiles Src homology 2 (SH2) domain profile. 809 877 IPR000980 -
Blo10g00716 877 MobiDBLite consensus disorder prediction 543 649 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00716 - - - qsu:111989336 735.717
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01153 Blo-Chr4:19407614 Blo10g00716 Blo-Chr10:22751686 1.62E-22 dispersed
Blo10g00716 Blo-Chr10:22751686 Blo19g00292 Blo-Chr19:18471993 1.90E-42 dispersed
Blo10g00716 Blo-Chr10:22751686 Blo02g00864 Blo-Chr2:33006748 2.04E-40 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g12 . . . . Bpe09g00273 . . Bma13g00915 . . Cma01g01277 . Car01g01092 . . . Cpe02g00648 Bhi09g03581 Tan01g4242 . . . . . . . . . . . . . . . . Lsi04g01968 Csa04g02247 . . . Blo10g00716 . Bda12g00798 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000795 3 6 3 2 3 0 4 0 0 2 2 0 4 3 2 4 0 2 4 0 3 2 1 1 2 3 1 1 2 5 65
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12844 None None None None Blo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo10g00716 Blo_Chr10 FPKM 8.215067 6.878652 15.670805 15.908625 38.426811 39.448204 37.874222 0.725738 0.425229 0.29352