Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo10g00732 | ATGTCTCTTCGCAAAGCTTTGTTGTCTCGGATTTCTTCTTCCAAGTCTTTTAAGGAATCCAAAGGTGTGGAAGAGGTTGCGCCGGTCGATCCGGAGATCGGGAAAGATTTGTCAGCCGAGTCTTCTGGCGTAGTTTGTGACTCGGCCTGGTCTTCCATGCTTCCGGAGATCCTCGGCGACATTATAAGGCGCGTTGAGGTTAGCGACGAACTGTGGCCTCGCAGACAGAACGTTGTTGCTTGTGCTTGTGTGTGCAAGCGCTGGAGGGATCTTGCGAAGGAGATCGTCGCGGCTCCTTCGCTCAGTGGAAAAATCACTTTCCCTTCTTGTCTTAAGCAGCCTGGGCCGCGTGACCTTCCACATCAATGTATTATACAACGAAACAAGAAAAATTCAACTTTTAAACTCTATCTCGCTCTTAGTCAATCATTCACAGATAAGGGAAAGTTTCTCTTAGCTGCCCGGAGAAATAGGCATGGAGCTCACACAGAGTATATTATTTCTCTTGATGCTGAAGACATATCTCAAGGAAGCAATGCTTATGTAGGAAAATTAAGCTCGGACTTTATTGGCAACAATTTCACAATTTATGATAGCCAACCACCACACAGTGGTGCAAAGCCATCAAGTAGTAAAGCCAGCCGTCGTTTTGCAAGCAAGCAAATAAGTCCCCAAGTTCCTGCAGGCAACTTTGAGGTTGGGCAAGTCTCTTACAAATTCAACCTTTTGAAATCGAGAGGTCCAAGAAGGATGATGTGCTTGTTGAAATACCCTTGGTTGGGAGAAACTGCCCTCCATAAACCATTGGAGCCCTCCAAGACACAGAAATCAGATCCTTCTTCTCCAGGTTTCACAATCTTGAAAAACAAAGCTCCAAGATGGCATCAGCATCTGCAATGCTGGTGTTTGAATTTCCATGGGCGAGTGACAGTGGCTTCAGTGAAGAACTTTCAACTCATTGCCACCACTGACCAGAGCCAACCCGGCGGAAAAGGAGATGAAGAAACAGTTCTCCTCCAGTTTGGGAAAGTGAATGACAACTTGTTCACCATGGATTACAGGCAGCCGTTGTCGGCGTTTCAAGCTTTCGCCATTTGCCTCACCAGCTTCGGCACAAAACTCGCCTGCGAGTAG | 1134 | 46.91 | MSLRKALLSRISSSKSFKESKGVEEVAPVDPEIGKDLSAESSGVVCDSAWSSMLPEILGDIIRRVEVSDELWPRRQNVVACACVCKRWRDLAKEIVAAPSLSGKITFPSCLKQPGPRDLPHQCIIQRNKKNSTFKLYLALSQSFTDKGKFLLAARRNRHGAHTEYIISLDAEDISQGSNAYVGKLSSDFIGNNFTIYDSQPPHSGAKPSSSKASRRFASKQISPQVPAGNFEVGQVSYKFNLLKSRGPRRMMCLLKYPWLGETALHKPLEPSKTQKSDPSSPGFTILKNKAPRWHQHLQCWCLNFHGRVTVASVKNFQLIATTDQSQPGGKGDEETVLLQFGKVNDNLFTMDYRQPLSAFQAFAICLTSFGTKLACE | 377 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 22992816 | 22995804 | - | BLOR02522 | Blo10g00732 | 65928 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo10g00732 | 377 | Gene3D | Tubby Protein; Chain A | 106 | 377 | IPR025659 | - | |
Blo10g00732 | 377 | PRINTS | Tubby superfamily signature | 287 | 304 | IPR000007 | - | |
Blo10g00732 | 377 | PRINTS | Tubby superfamily signature | 334 | 353 | IPR000007 | - | |
Blo10g00732 | 377 | PRINTS | Tubby superfamily signature | 230 | 257 | IPR000007 | - | |
Blo10g00732 | 377 | PRINTS | Tubby superfamily signature | 165 | 181 | IPR000007 | - | |
Blo10g00732 | 377 | PRINTS | Tubby superfamily signature | 181 | 205 | IPR000007 | - | |
Blo10g00732 | 377 | PRINTS | Tubby superfamily signature | 305 | 321 | IPR000007 | - | |
Blo10g00732 | 377 | PRINTS | Tubby superfamily signature | 355 | 377 | IPR000007 | - | |
Blo10g00732 | 377 | ProSitePatterns | Tub family signature 2. | 362 | 377 | IPR018066 | - | |
Blo10g00732 | 377 | ProSitePatterns | Tub family signature 1. | 305 | 318 | IPR018066 | - | |
Blo10g00732 | 377 | SUPERFAMILY | Tubby C-terminal domain-like | 99 | 377 | IPR025659 | - | |
Blo10g00732 | 377 | MobiDBLite | consensus disorder prediction | 200 | 221 | - | - | |
Blo10g00732 | 377 | Pfam | F-box domain | 50 | 96 | IPR001810 | GO:0005515 | |
Blo10g00732 | 377 | Pfam | Tub family | 111 | 372 | IPR000007 | - | |
Blo10g00732 | 377 | PANTHER | TUBBY-LIKE F-BOX PROTEIN 7 | 1 | 377 | - | - | |
Blo10g00732 | 377 | PANTHER | TUBBY-RELATED | 1 | 377 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo10g00732 | Blo-Chr10:22992816 | Blo12g00786 | Blo-Chr12:26257209 | 7.64E-120 | dispersed | |
Blo10g00732 | Blo-Chr10:22992816 | Blo02g00865 | Blo-Chr2:33067374 | 2.06E-123 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12847 | PF01167 | Tub | 3.40E-99 | CL0395 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo10g00732 | K19600 | - | mnt:21387850 | 541.576 |