Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00737 ATGGCATTGCCGATAACCAACCGACGCGTTTCGGGTTCCGGTGACCTGAATATTCCATACAGAATAGAGACCATAAATCTTTCTTACAAAATACTAGGCGAGACGAGATGGTTTCAGTCTGGTGGGTCATCATCGGGAGGTTCGAAGTTTATTCTGAAGAATGTCAATTGCGAGGCAAATGCCGGTGAGATGACTGCGATAGTGGGCCCCAGCGGTGCCGGTAAAACGACTCTGTTGGAGATTCTCGGTGGAAAGACATCGGGAAAGAATATTTCCGGTCAAGTTCTCGTCAATGATGAGCCTGTGAGTGATAAAAGATTTCAAAGAATTTTAGGGTATGTCACCCAAGATGATGCTCTCTTCCCTCTACTTACAGTGGAAGAAACTCTCATGTATAGTGCTCTGCTGAGGCTTCATGGGAGAGAGATCGAACGAGTTTCTCGAGTGAGAGAACTCATGAAGGAGCTCGGACTCGAGAAAGTTGCAGCATCGAAAATCGGCCGGGGATCGAACTGGGGCATTTCGGGCGGCGAAAGGCGGAGAGTTTCGATCGGGATCGACTTGGTTCATGACCCACCCATGATTTTGATCGACGAACCAACTTCAGGGCTGGATTCAGCCTCAGCTCTTCATGTCATCTCAGTGCTTAAAAAAATGACTGCAAATCAAGGCAAGACTATTGTTTTAACCATCCATCAGCCTGGTTTCCGAATTATTGAACTCTTTGATCGACTCGTTCTACTATCGAATGGATTTGTTGTCCATAACGATTCACTAAATTGTCTTGAAGAAAGGCTTCGACTGGCTGATCATATCATACCTCACCATGTCAATGCGCTTGAATACTCCATGGATGTTTTGGACAGCTTGGCTGTACATTCTCCAGCAGTTTCTCCCAAAAACCCGAGTTTCCTGCAAGATAAAACAACTAACTCTTCATTTCCAAGGAACAACAAAGAAAACCCTTTTTCCTATGCAAATTCTCAGATGATAGAGATTCTCATTCTTGGACAGAGATTTTGCAGAAACATATTCAGAACCAAACAGCTTTTTGCCACTAGAATTATTCAAGCATTAGTAGCTGGATTGATACTAGGAACTATATTTCTAAACAACGGCAATGAACACGGACAAATCGCATTGCAAACCCGGCTCGGCTTTTTCGCATTCAGTCTCACTTTCTTGCTGTCTTCATCAACAGAAGGGTTACCAATCTTCTTACAGGAGAGAAGAATCATAATGACAGAGACATCAAGAGGAGCATACAGAATTTCTTCTTATGTTTTGGCAAACACACTAGTCTTTCTTCCATTCCTATTGATGGTGAGTCTTCTCTACGCAACCCCAGTTTACTGGTTAGTGGGTTTGAGAAAGGAGATTTTCAGCTTTCTCTACTTCTGTCTAGTGGTTTGGATGGTAGTGTTGATGTCTAACTCTTTGGTAGCCTGCTGCAGTGCTCTTGTCCCAAACTTTATAATGGGTACCTCAATCATAGCAGGGTTGATGGGATCATTCTTTCTGTTTTCTGGGTATTTCATATCAAAGCAAAACATACCTAAATATTGGATTTTCATGCACTATTTGAGTCTTTTCAAGTACCCATTTGAGTGTTTTATGATAAATGAGTATGGAGAAGAGGGAGGAAGGAGAAGAAAGTGCATAGAGATTCAGGAAGGGCAATGCAGACTCTATGGAGGAGAATTCTTAGCTCAACAAGGACTACAAGAGTCACAGAAATGGAGCAATTTGGCAGTCATGCTAGGCTTCATCATTGGGTATAGATTTCTTTCTTTCCTCATTCTATGGTTCAGATGTTGTAGAAACAACAGACACTAG 1836 42.59 MALPITNRRVSGSGDLNIPYRIETINLSYKILGETRWFQSGGSSSGGSKFILKNVNCEANAGEMTAIVGPSGAGKTTLLEILGGKTSGKNISGQVLVNDEPVSDKRFQRILGYVTQDDALFPLLTVEETLMYSALLRLHGREIERVSRVRELMKELGLEKVAASKIGRGSNWGISGGERRRVSIGIDLVHDPPMILIDEPTSGLDSASALHVISVLKKMTANQGKTIVLTIHQPGFRIIELFDRLVLLSNGFVVHNDSLNCLEERLRLADHIIPHHVNALEYSMDVLDSLAVHSPAVSPKNPSFLQDKTTNSSFPRNNKENPFSYANSQMIEILILGQRFCRNIFRTKQLFATRIIQALVAGLILGTIFLNNGNEHGQIALQTRLGFFAFSLTFLLSSSTEGLPIFLQERRIIMTETSRGAYRISSYVLANTLVFLPFLLMVSLLYATPVYWLVGLRKEIFSFLYFCLVVWMVVLMSNSLVACCSALVPNFIMGTSIIAGLMGSFFLFSGYFISKQNIPKYWIFMHYLSLFKYPFECFMINEYGEEGGRRRKCIEIQEGQCRLYGGEFLAQQGLQESQKWSNLAVMLGFIIGYRFLSFLILWFRCCRNNRH 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 23065163 23066998 - BLOR02527 Blo10g00737 65933

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00737 611 Gene3D - 40 270 IPR027417 -
Blo10g00737 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 267 IPR027417 -
Blo10g00737 611 ProSitePatterns ABC transporters family signature. 174 188 IPR017871 GO:0005524
Blo10g00737 611 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 22 275 IPR003439 GO:0005524
Blo10g00737 611 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 2 602 - -
Blo10g00737 611 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 602 - -
Blo10g00737 611 Pfam ABC-2 type transporter 333 543 IPR013525 GO:0016020|GO:0140359
Blo10g00737 611 SMART AAA_5 61 252 IPR003593 -
Blo10g00737 611 Pfam ABC transporter 52 202 IPR003439 GO:0005524
Blo10g00737 611 CDD ABCG_EPDR 49 254 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00737 K05681 ABCG2, CD338; ATP-binding cassette, subfamily G (WHITE), member 2 - qsu:111992190 817.764
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00359 Blo-Chr7:5798970 Blo10g00737 Blo-Chr10:23065163 4.10E-164 dispersed
Blo10g00737 Blo-Chr10:23065163 Blo16g00556 Blo-Chr16:22851211 0 dispersed
Blo10g00737 Blo-Chr10:23065163 Blo04g00093 Blo-Chr4:805605 9.30E-105 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g128 . . . . Bpe09g00254 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag1028 Cone15ag1013 . . . . . Blo10g00737 . Bda12g00821 . . . . . . . . . . . Cpe14g00374 . . . . . . . . . . . . . . . . Csa04g00799 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003301 1 2 1 0 2 2 1 2 2 1 2 2 2 1 1 1 2 4 2 2 1 2 2 2 1 1 2 2 2 2 50
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo10g00737 Blo_Chr10 FPKM 11.923188 12.628621 109.506371 117.421478 1.828852 1.463176 2.106451 235.796936 226.840927 230.553818