Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00760 ATGACGGCTTCAGCAGTATCCGTAGCCATGAACGGAGGAGTACGTGTCGCTGCATCCACGCATTCGCAGGCATATTTGGAGTGCAAAGCTGTGAATGATACAAAGGTTCTAATATCGGAGCTCTGCCGCCAATTCTATAACCTCGGATGGGTCTCCGGTACCGGTGGCAGTATCACTATGAAGGTCCACGATGACTCTATTCCTAAACCCAATCAGCTGATTGTCATGTCCCCTTCTGGTGTTCAGAAGGAGAGAATGGTGCCAGAAGACATGTATGTAATGTCTTCCAGTGGATCTATCCTGTCCTCACCTATTCCAAAGCCATATCCTCATAAGCCTCCAAAGTGTTCTGATTGCGGCCCACTTTTTATGAAGGCCTATTCAATGCGAAATGCAGGAGCTGTCATACATAGTCATGGATTAGAATCCTGTCTTGTTACCATGATCAATCCATCATCTAAAGAGTTTCGAATAACTCACATGGAAATGATAAAAGGAATTCAAGGGCATGGATATTATGACGAACTTGTGGTGCCAATTATAGAGAACACTGCATATGAATACGAGCTCACAGAATCTCTTGCTAATGCTATTCAAGAATACCCGAAAACAACAGCTGTGCTTGTTCGCAATCACGGTATTTATGTGTGGGGTGATTCATGGATAAGTACCAAAACGCAGGCTGAATGTTATCACTATCTCTTTGAGGCTGCTCTCAAGCTTCATCAACTGGGCCTAGACTGGTCTACTCCGAGTCACAGTCCTATTCAGAGAGGCAAAGGAATTTCTGCTAAATCTGGGACTGTGGATTTAACTCATACAATTGAGCCATTGCCTCGCTGCATTGTTCTTGACATTGAAGGAACTACTACTCCTATATCATTTGTGACTGATATTCTCTTTCCTTATGCCCGCGATAATGTTGGGAAGCACTTATCTTTAACATTTCACACTCCAGAAACTCAAGAAGACATTAAGTTGTTGCGTGATCAGGCTCAAAAAGACTTGGAAAATGGAGTTACTGGGGCAGTGCCTATTCCTGCAGATAATTCAGGGAAAGAGGAGGTGATTGAAGCAGTAGTTGCTAATGTTGCAGCGATGATAAAAGCCGACAGGAAAATCACTGCCTTGAAACAACTGCAAGGTCACATATGGAGAACTGGCTTTGAACAGGGTGAGCTGGAGGGAGTAGTCTTTGAGGACGTACTAGTAGCTTTTGAAAGGTGGCATGCTTTGGGCATAAAGCTCTACATATACTCCAGCGGTAGCAGGCTGGCTCAAAGGCTTTTATTTGGAAAGACCAAGCACGGCGATTTAAGAAAATTCTTATCCGGGTTTTTCGATACGACCGTGGGGAACAAGAGAGAAGTCAACAGCTATGTTGAAATCTCAGAATACCTTGGCGTCAAGCCATCAGAGATTCTGTTTCTAACTGATGTCTTCCAAGAAGCTGCAGCAGCAAAGGCTGCAGGATTGGAATCGATCATTTCTATCCGACCCGGAAATGGACCTCTTCCTGATAACCACGGATTCAAGACAATCACTTCTTTTGCGGAAATCTGA 1563 44.15 MTASAVSVAMNGGVRVAASTHSQAYLECKAVNDTKVLISELCRQFYNLGWVSGTGGSITMKVHDDSIPKPNQLIVMSPSGVQKERMVPEDMYVMSSSGSILSSPIPKPYPHKPPKCSDCGPLFMKAYSMRNAGAVIHSHGLESCLVTMINPSSKEFRITHMEMIKGIQGHGYYDELVVPIIENTAYEYELTESLANAIQEYPKTTAVLVRNHGIYVWGDSWISTKTQAECYHYLFEAALKLHQLGLDWSTPSHSPIQRGKGISAKSGTVDLTHTIEPLPRCIVLDIEGTTTPISFVTDILFPYARDNVGKHLSLTFHTPETQEDIKLLRDQAQKDLENGVTGAVPIPADNSGKEEVIEAVVANVAAMIKADRKITALKQLQGHIWRTGFEQGELEGVVFEDVLVAFERWHALGIKLYIYSSGSRLAQRLLFGKTKHGDLRKFLSGFFDTTVGNKREVNSYVEISEYLGVKPSEILFLTDVFQEAAAAKAAGLESIISIRPGNGPLPDNHGFKTITSFAEI 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 23786427 23791417 + BLOR02550 Blo10g00760 65956

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00760 520 Gene3D - 293 389 - -
Blo10g00760 520 Hamap Enolase-phosphatase E1 [mtnC]. 278 520 IPR023943 GO:0000287|GO:0019509|GO:0043874
Blo10g00760 520 CDD HAD_EP 281 501 IPR023943 GO:0000287|GO:0019509|GO:0043874
Blo10g00760 520 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 9 520 - -
Blo10g00760 520 Gene3D - 31 261 IPR036409 -
Blo10g00760 520 SMART Aldolase_II_2 36 239 IPR001303 -
Blo10g00760 520 SUPERFAMILY HAD-like 280 520 IPR036412 -
Blo10g00760 520 Gene3D - 390 520 IPR023214 -
Blo10g00760 520 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 280 519 - -
Blo10g00760 520 SFLD enolase-phosphatase 280 519 IPR023943 GO:0000287|GO:0019509|GO:0043874
Blo10g00760 520 Hamap Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1. 23 520 IPR027505 -
Blo10g00760 520 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 9 520 IPR017714 GO:0005737|GO:0019509|GO:0046872
Blo10g00760 520 Hamap Methylthioribulose-1-phosphate dehydratase [APIP]. 23 247 IPR027514 GO:0005737|GO:0019509|GO:0046872
Blo10g00760 520 Pfam Class II Aldolase and Adducin N-terminal domain 38 238 IPR001303 -
Blo10g00760 520 SUPERFAMILY AraD/HMP-PK domain-like 33 253 IPR036409 -
Blo10g00760 520 TIGRFAM enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 280 518 IPR023943 GO:0000287|GO:0019509|GO:0043874
Blo10g00760 520 Hamap Enolase-phosphatase E1 [ENOPH1]. 280 520 IPR027511 GO:0019509
Blo10g00760 520 TIGRFAM salvage_mtnB: methylthioribulose-1-phosphate dehydratase 38 244 IPR017714 GO:0005737|GO:0019509|GO:0046872
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00760 K16054 DEP1; methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1 [EC:4.2.1.109 3.1.3.77] - jre:109013151 816.994
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g201 . . . . Bpe09g00237 . . Bma13g00947 Cmo16g00433 . Cma01g01212 . Car01g01036 . Sed04g2403 . Cpe02g00698 Bhi09g03436 Tan01g0815 . . Hepe01g1391 . . Cla11g01757 Cam11g1824 Cec11g1844 Cco11g1851 Clacu11g1984 Cmu11g1794 Cre11g2201 Cone6ag0152 Cone9ag0177 . Cone15ag1052 Lsi04g02067 Csa04g02338 Chy07g00069 . . Blo10g00760 . Bda12g00837 . . . . . Cmo01g01266 . . Cma16g00399 . Car16g00364 Cpe14g00336 . . . . . . . . . . . . . . . . . Chy06g01160 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002536 1 3 1 2 1 1 2 1 1 2 2 2 2 2 2 2 1 3 1 2 2 2 2 2 2 2 2 4 3 2 57
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo10g00760 Blo_Chr10 FPKM 12.433312 13.578797 39.757557 35.929062 29.439281 30.83638 27.044825 70.27269 71.803993 70.844116