Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00765 ATGGCCGATTCTTCAAATTCTGCCTGCCAAAAGTCTGGCAATACTTCCAGGATCTCAAACAGAAATCCAAAGCCTCTCCGCAGACCTAATTCTAACTTATATAATATTTATGATTCTAGAGAGAGAGACACTGCTGAATTGGCTAATACAGATAACCTTATAAACCAGTGTGGCTTATCCGGGATTTACCAGGACGAAGTAGTAGACCCTTATGCCGATATCAGAAAATGGGGTGACCTTAGTTTGAGGCAATGGCTCGATAAACCCGAAAGACGTGTTGATTCATCCGAATCTCTTCATGTATTTAAGCAAATAGTCGAGATTGTCAATCTTGCACATTCGCAGGGAATTGTTGTTCATAATGTCTGTCCTTCGTGCTTCGTAATGTCTTCTTTTAACCATGTCTCCTTCATTGAATCCGCTTCGTGTTCGGATTCCGGCGGAGATTCGCCTAAAGACGGTGAAAATAGCGAAGCTTTGGATGGTGGAAATGAGTCGTTGCCCTTACCAAGAAGCATGGGAGAAGATAATACTAGTCTTCAACTCGGTACATCTTCAACAATTGCTCTATCCGAAGCTAGTTGTATGCAATCAAATTCATACAAACTATCGTTGGTCGAAGAGACCAAGAAAGATCGAAAACGACCTACAAATGCGGAAGAAAAACAAGAAAATAAACAACAACTTCCATTGACGCAGATCTTAGTTATGGAGGCTTGTTGGTATACTAGTCCTGAGGAGGCTTCTGGTGGCCAAAGTTCATTTGCCTCGGACGTATATCAATTAGGCGTTCTTCTATTCGAGTTATTCTGCTCCTTCAGCTCTAGAGAAGAGAAGAGCAGAACCATGTCGAGCCTAAGACATCGAGTTCTTCCTCCTCAATTGCTGTCGAAGTGGCCAAACGAAGCTTCCTTTTGCCTTTGGTTGTTGCATCCGGACCCAAATAGTCGACCAAAGCTGAGCGAATTGTCGCAGACTGACTTCCTTAACGAACAGAAAGATGACATGGAGGATCGAGAATCAGCAATCGAGATCCAAGAAAAAATAGAGGAGCAAGAGCTGCTCCTAGAAATTCTTCTGCTCATACAACAAAGAAAGCAGGAGGCTTCCATGAAGTTGCAAGACAGAATTACTTTATTGTGCTCTGACATAGAAGAAGTTTCAAATCACCAATCGTATCTCCTGCAAAATAATACTTCTGGTTCCGAGATCGGGATAGAAGACCAATTAGCATCAGTTCTTCCTTCTGTGAGCGCTGTTGAAAATGACGAATCTGTCTGCTTGGGATCTCGGAAAAGAGTTAGGCCGAGAATCGCTGAAAATGAAACAGGTGTTGTTGGAAGTGAGAATGAAAAGGAAAAATCGCACATAATTGGTAAAAGTGGAGAAAGCTTTCTCTCTGGAAGTTCTAGATTGATGAAACACTACAAGAACTTGGAATTGGCTTACGTTTCTATGAGATGTCAGCCAAACAAGTCCCAAGAAAAACAGTCAGTCCGGCATTCATCAGTTAGTAACAACGGCAAAGGGTCGATCACAACAGAAAAAAGTTCTGTTTATGATTTGGTGTCTAAGCTACCAGAGGAGAGTAGAAAAGGTGGTTGGATAAATCCTCTCCTTGAAGGCTTCTGTAAATATCTAACCTATAATAAGTTGAAAATTAAGGCAGATTTGAAGCAAGGGGATCTCTTGAGCTCTTCCAACCTTGTATGTTCACTTGGATTTGACCGTGATGGGGAGTTTTTCGCTACTGCAGGCGTAAATAAGAAGATTAAAGTCTTTGAATACGATCCGATCATAACCGAAGAGCATAATGTCCATTACCCAGTTGTTGAAATGGCCAGTGAGTCCAAGTTAAGCAGTGTCTGTTGGAACAGCTATATTAAAAGCCAAATCGCTTCCAGCAATTTTGCTGGTGTTGTTCAAGTATGGGATGTTTCAAGAAGACAAGTAATAACAGAAATGAAAGAACACGAGAGGCGAATTTGGTCTATCGACTTCTCATCAGCAGATCCAATGATGTTAGCAAGCGGAAGTGACGATGGGTCCGTGAAGCTATGGAGTATCAATCAGGCAATTGTACTTTTGCATTTTGTGTATGAAGCAAGTATTGGCACCATTAAAACAAAAGCTAATGTCTGCTGTGTTCAGTTTCCCACGGATGCAAGCCGTTCAATCGCATTTGGCTCAGCGGATCACAGAATCTATTATTATGATTTGAGAAATATGAAAGCCCCATTGTGCAGTTTTGCTGGACACAATAAGACTGTGAGTTATGTCAAGTTTGTAGATTCAACCAATCTCGTTTCTGCATCAACTGATAACACCTTGAAGCTTTGGGACTTGTCAAAGTGTATGTCTCGGGTTGTCGACGCTCCACTTCAATCATTTACAAGCCATGTTAATGTGAAGAACTTTGTGGGTTTATCTGTCTCAGATGGTTATATTGCTACTGGTTCAGAGACTAATGAGGTTTTCATCTACCACAAAGCGTTCCCAATGCCGTCTTTATCGTTCAAGTTTCACACAGACCCGTTTTCTCTTCTGGAAATAGACGAATCATCCCAGTTTATCTCCTCCGTTTGCTGGCGCCACCAGTCGTCCACATTGGTCGCGGCAAATTCCGCCGGCAGTGTCAAGATTTTAGAGATGGCGTAG 2658 42.02 MADSSNSACQKSGNTSRISNRNPKPLRRPNSNLYNIYDSRERDTAELANTDNLINQCGLSGIYQDEVVDPYADIRKWGDLSLRQWLDKPERRVDSSESLHVFKQIVEIVNLAHSQGIVVHNVCPSCFVMSSFNHVSFIESASCSDSGGDSPKDGENSEALDGGNESLPLPRSMGEDNTSLQLGTSSTIALSEASCMQSNSYKLSLVEETKKDRKRPTNAEEKQENKQQLPLTQILVMEACWYTSPEEASGGQSSFASDVYQLGVLLFELFCSFSSREEKSRTMSSLRHRVLPPQLLSKWPNEASFCLWLLHPDPNSRPKLSELSQTDFLNEQKDDMEDRESAIEIQEKIEEQELLLEILLLIQQRKQEASMKLQDRITLLCSDIEEVSNHQSYLLQNNTSGSEIGIEDQLASVLPSVSAVENDESVCLGSRKRVRPRIAENETGVVGSENEKEKSHIIGKSGESFLSGSSRLMKHYKNLELAYVSMRCQPNKSQEKQSVRHSSVSNNGKGSITTEKSSVYDLVSKLPEESRKGGWINPLLEGFCKYLTYNKLKIKADLKQGDLLSSSNLVCSLGFDRDGEFFATAGVNKKIKVFEYDPIITEEHNVHYPVVEMASESKLSSVCWNSYIKSQIASSNFAGVVQVWDVSRRQVITEMKEHERRIWSIDFSSADPMMLASGSDDGSVKLWSINQAIVLLHFVYEASIGTIKTKANVCCVQFPTDASRSIAFGSADHRIYYYDLRNMKAPLCSFAGHNKTVSYVKFVDSTNLVSASTDNTLKLWDLSKCMSRVVDAPLQSFTSHVNVKNFVGLSVSDGYIATGSETNEVFIYHKAFPMPSLSFKFHTDPFSLLEIDESSQFISSVCWRHQSSTLVAANSAGSVKILEMA 885
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 23909586 23913338 - BLOR02555 Blo10g00765 65961

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00765 885 MobiDBLite consensus disorder prediction 143 178 - -
Blo10g00765 885 Gene3D - 541 885 IPR015943 GO:0005515
Blo10g00765 885 Gene3D Transferase(Phosphotransferase) domain 1 79 341 - -
Blo10g00765 885 SMART WD40_4 790 829 IPR001680 GO:0005515
Blo10g00765 885 SMART WD40_4 648 688 IPR001680 GO:0005515
Blo10g00765 885 SMART WD40_4 560 595 IPR001680 GO:0005515
Blo10g00765 885 SMART WD40_4 700 739 IPR001680 GO:0005515
Blo10g00765 885 SMART WD40_4 844 883 IPR001680 GO:0005515
Blo10g00765 885 SMART WD40_4 743 781 IPR001680 GO:0005515
Blo10g00765 885 SMART WD40_4 606 645 IPR001680 GO:0005515
Blo10g00765 885 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 655 690 - -
Blo10g00765 885 SUPERFAMILY WD40 repeat-like 565 882 IPR036322 GO:0005515
Blo10g00765 885 PANTHER PROTEIN SPA1-RELATED 2 1 884 IPR044630 GO:0009640
Blo10g00765 885 ProSiteProfiles Trp-Asp (WD) repeats profile. 655 690 IPR001680 GO:0005515
Blo10g00765 885 MobiDBLite consensus disorder prediction 206 222 - -
Blo10g00765 885 MobiDBLite consensus disorder prediction 492 512 - -
Blo10g00765 885 MobiDBLite consensus disorder prediction 206 227 - -
Blo10g00765 885 SMART serkin_6 11 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo10g00765 885 PRINTS G protein beta WD-40 repeat signature 675 689 IPR020472 -
Blo10g00765 885 PRINTS G protein beta WD-40 repeat signature 768 782 IPR020472 -
Blo10g00765 885 PRINTS G protein beta WD-40 repeat signature 632 646 IPR020472 -
Blo10g00765 885 ProSiteProfiles Protein kinase domain profile. 1 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo10g00765 885 SUPERFAMILY Protein kinase-like (PK-like) 80 332 IPR011009 -
Blo10g00765 885 PANTHER PROTEIN SPA1-RELATED 3 1 884 - -
Blo10g00765 885 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 750 783 - -
Blo10g00765 885 ProSitePatterns Trp-Asp (WD) repeats signature. 768 782 IPR019775 -
Blo10g00765 885 MobiDBLite consensus disorder prediction 1 32 - -
Blo10g00765 885 Pfam WD domain, G-beta repeat 746 781 IPR001680 GO:0005515
Blo10g00765 885 Pfam WD domain, G-beta repeat 651 688 IPR001680 GO:0005515
Blo10g00765 885 ProSiteProfiles Trp-Asp (WD) repeats profile. 750 783 IPR001680 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00765 - - - qsu:111982906 1082.78
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00765 Blo-Chr10:23909586 Blo06g00475 Blo-Chr6:26213129 2.44E-07 dispersed
Blo02g00061 Blo-Chr2:405310 Blo10g00765 Blo-Chr10:23909586 7.37E-104 transposed
Blo03g00327 Blo-Chr3:6837903 Blo10g00765 Blo-Chr10:23909586 3.46E-134 transposed
Blo11g00159 Blo-Chr11:1243531 Blo10g00765 Blo-Chr10:23909586 6.36E-109 transposed
Blo15g00164 Blo-Chr15:1667827 Blo10g00765 Blo-Chr10:23909586 1.42E-47 transposed
Blo10g00765 Blo-Chr10:23909586 Blo03g00652 Blo-Chr3:27727342 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g217 . . Bda07g00298 . . Bpe08g01023 . . . . . . . Car09g00777 . . . Bhi09g02022 . . . . . . . . . . . . . . . . . Lsi04g02073 . . . . Blo10g00765 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003437 3 3 1 2 3 0 2 1 0 1 1 1 2 1 1 2 0 2 2 1 1 1 1 1 1 1 1 3 2 4 45
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84501 PF00400 WD40 0.00015 CL0186 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo10g00765 Blo_Chr10 FPKM 119.544792 121.919556 203.442657 202.940033 206.809097 206.08519 191.994049 249.517838 254.365982 240.150009