Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00796 ATGCTTGAGCCGCAAAGCTCATTGTACCGATTTCATATAGTGATTTCTCCTCTGCCCGTGGTTTTTTCCCGTCTTGGGTTTTCCACTTCGCGGGCTCAGGAAGCAGTCATCAATGGCCGACCGTTCTCGGAAACCCTACTAGAGGTTCTGTACGAAATCAACGAGCAGCTTCAAGCAGATTCAATAGATGTTCCTTTAACAAACGTTCGCCCTGTAAAAAGAGTTGCTCTCGTAGTAATCACTGGAAATCGAGGTCTTTGCGGCGGCTTCAACAATTCGGTGATAAAAAAAGCTGAATATCGAATCACTGAATTGGGGAACCTCGGATTGGATCACACAGTAATCAGCGTCGGAACCAAGGGGAATTCTCATTTCATGCGTAAGCCAAATGTCGAAGTAGACAGTTTCATTCAAAGAGGTCCATTTCCAACTGTCAAAGAAGCTCAAACTATTGCAGACAAAGTGTTTTCTCGTTTTCTCACTGAAGAAGTGGATAAGGTTGAGCTTTTATACACAAAATTTGTCTCTCTAATTTCTTCAAGCCCTGTGATCTACACACTGCTTCCTCTTTCCCGAAAAGGTAAAATCCTTGATGTGAATGGAAATTCCATTGATGCAGAGGAAGATGAGCTCTTCAGATTAACAACAAAGGAAGGGAAATTGAGTCTAGAAAGAGAGAAAATTGAGAGAAAGAAGAAAGGGTTCACGCCATCTTTAGAATTCGAGCAAGACCCAGTTCAGATTCTCAATGCTATGATGCCTCTGTATTTGAATAGTCAGATTTTGAGGGCATTGCAGGAATCCACCGCCAGTGAATTGGCTGCTAGAATGACAGCTATGACGAATGCTACTGATAATGCTGTTGAATTAAAGAGGTCTCTTTCGATTGCCTACAACAGGGAAAGACAAGCCAAAATTACAGGAGATACTATGGAGATTGTAGCTGGAGCCGAGGCACTTAAAGGTTTGGATTGA 975 42.56 MLEPQSSLYRFHIVISPLPVVFSRLGFSTSRAQEAVINGRPFSETLLEVLYEINEQLQADSIDVPLTNVRPVKRVALVVITGNRGLCGGFNNSVIKKAEYRITELGNLGLDHTVISVGTKGNSHFMRKPNVEVDSFIQRGPFPTVKEAQTIADKVFSRFLTEEVDKVELLYTKFVSLISSSPVIYTLLPLSRKGKILDVNGNSIDAEEDELFRLTTKEGKLSLEREKIERKKKGFTPSLEFEQDPVQILNAMMPLYLNSQILRALQESTASELAARMTAMTNATDNAVELKRSLSIAYNRERQAKITGDTMEIVAGAEALKGLD 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25340098 25341217 - BLOR02586 Blo10g00796 65992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00796 324 PANTHER ATP SYNTHASE GAMMA CHAIN 31 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Blo10g00796 324 Hamap ATP synthase gamma chain [atpG]. 1 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Blo10g00796 324 Gene3D ATP synthase, gamma subunit, helix hairpin domain 217 320 - -
Blo10g00796 324 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 30 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Blo10g00796 324 PRINTS ATP synthase gamma subunit signature 267 286 IPR000131 GO:0015986|GO:0045261|GO:0046933
Blo10g00796 324 PRINTS ATP synthase gamma subunit signature 165 182 IPR000131 GO:0015986|GO:0045261|GO:0046933
Blo10g00796 324 PRINTS ATP synthase gamma subunit signature 72 91 IPR000131 GO:0015986|GO:0045261|GO:0046933
Blo10g00796 324 PRINTS ATP synthase gamma subunit signature 298 319 IPR000131 GO:0015986|GO:0045261|GO:0046933
Blo10g00796 324 Pfam ATP synthase 30 320 IPR000131 GO:0015986|GO:0045261|GO:0046933
Blo10g00796 324 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 31 320 - -
Blo10g00796 324 Gene3D - 64 191 - -
Blo10g00796 324 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 30 320 IPR035968 GO:0015986|GO:0045261|GO:0046933
Blo10g00796 324 CDD F1-ATPase_gamma 31 317 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00796 Blo-Chr10:25340098 Blo10g00834 Blo-Chr10:26597346 2.38E-35 dispersed
Blo10g00796 Blo-Chr10:25340098 Blo15g00334 Blo-Chr15:3972939 4.92E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00796 K02115 - zju:107432905 445.662