Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00804 ATGGTTTCGCCGGAAAATACCAATTGGCTCTTTGATTACGGATTGATCGACGATATTCCTGTCCCGGATTCTACTTTCCCTGTAGCGAATTCCGGTTTCTCTTGGCCTGCGACTGCTCTCAATGGCTCCTCTAGTGTCAGTTTGGAAATTGATGGATCATTGGGAGAACCAGATGAACTCAAGGAACCTGGCTCAAAAAAGAGAGTTAGAACTGAATCCAATTGTGGAACTAGCTCCAAGGCATGTAGGGAGAAGTTGCGAAGGGACAGGCTGAACGACAAGTTTCTGGAATTGGGTGCTATATTGGAGCCTGGAAGGCCACCCAAAACAGATAAGGCTGCTATATTGAATGATGCCATCCGAATGGTAACCCAAATGAGGACAGAAGCCCAGAAGCTGAAAGACTCAAATTCAAGTCTGCAGGAGAAGATCAAAGAGCTGAAGGTCGAGAAAAATGAGCTTCGTGATGAGAAACAGAGGTTAAAGGGAGAGAAGGAGAAGCTGGAGCAACAAATGAAATCCTTGAATACACCCCCAAGTTTCTTGTCTTCCCCTCCTGCAATTCCAGCTGCATTTGCTGCTCCTGGCCAAGTTCCAGGAAATAAGTTGGTGCCATTCATCAGCTACCCAGGAGTTGCCATGTGGCAGTTCATGCCACCAACGGGTTCGATGTTCCTTATTTCCCTGAAACTTTCGGACATTGGTTGCAACTACGAGATTGTTAAGATTAAGAAGGCAAATCACGGTCATGTCGCTGCTAGAGTATTGGAAGGGCTTCTTTACGAAGCATTGGAGATTGAAATCTGCCGACAGGAACCTGAGGAACATAAATATCTCTATTCTCTGGAAGGAGTGGTATGGAACTTGGATCTCTAG 876 45.89 MVSPENTNWLFDYGLIDDIPVPDSTFPVANSGFSWPATALNGSSSVSLEIDGSLGEPDELKEPGSKKRVRTESNCGTSSKACREKLRRDRLNDKFLELGAILEPGRPPKTDKAAILNDAIRMVTQMRTEAQKLKDSNSSLQEKIKELKVEKNELRDEKQRLKGEKEKLEQQMKSLNTPPSFLSSPPAIPAAFAAPGQVPGNKLVPFISYPGVAMWQFMPPTGSMFLISLKLSDIGCNYEIVKIKKANHGHVAARVLEGLLYEALEIEICRQEPEEHKYLYSLEGVVWNLDL 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25399348 25403461 + BLOR02594 Blo10g00804 66000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00804 291 MobiDBLite consensus disorder prediction 52 73 - -
Blo10g00804 291 Gene3D - 77 152 IPR036638 GO:0046983
Blo10g00804 291 MobiDBLite consensus disorder prediction 54 69 - -
Blo10g00804 291 CDD bHLH_AtILR3_like 80 155 - -
Blo10g00804 291 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Blo10g00804 291 Coils Coil 116 178 - -
Blo10g00804 291 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Blo10g00804 291 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 80 151 IPR036638 GO:0046983
Blo10g00804 291 PANTHER BHLH TRANSCRIPTION FACTOR 1 221 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Blo10g00804 291 PANTHER TRANSCRIPTION FACTOR ILR3 1 221 - -
Blo10g00804 291 SMART finulus 81 132 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01435 Blo10g00804 CCT
Blo03g01435 Blo10g00804 ECH
Blo07g00920 Blo10g00804 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00106 Blo-Chr2:755710 Blo10g00804 Blo-Chr10:25399348 7.44E-60 dispersed
Blo10g00804 Blo-Chr10:25399348 Blo08g00166 Blo-Chr8:1909684 2.88E-68 dispersed
Blo11g00509 Blo-Chr11:4681862 Blo10g00804 Blo-Chr10:25399348 4.75E-06 dispersed
Blo10g00804 Blo-Chr10:25399348 Blo03g01435 Blo-Chr3:40925272 1.29E-115 wgd
Blo10g00804 Blo-Chr10:25399348 Blo07g00920 Blo-Chr7:28223111 3.04E-129 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12852 PF00010 HLH 2.80E-09 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00804 - - pper:18778871 343.199