Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo10g00809 | ATGACACGAGGCCGTTCAATCCTGTGTGGCACGGCCGCTAGTGAGCTTTCGGATTATGCCATCGTTGCTAGCAAGTTTTCAAATTATGCCATTGCTGCTCATATCTGTTGCAAGGGTGATTGGAATCGGCAATTTGAGAGGGATGCAAGGGGGTTGGCGTCTCGGCAGGGGAGTGCTATGCAGGAGAGCTGTTGGCCGAGAAGGATGAAGTTGGAGGACAGAACTGGAGCTCTGGCCGAGAACTCTGATCCGTTTGCTGATGCAAATGCTGAGGACTCTGGCGCTGGGGCAAAAGAGTATGTGCATATTCGAATTCAACAGCGGAATGGTAGGAAGAGTCTTACAACTGTGCAGGGACTGAAGAAAGAATTCAGCTACAACAAGATATTGAAGGACCTCAAGAAGGAGTTTTGCTGCAATGGTACAGTTGTTCAGGATCCAGAGCTAGGCCAGGTTATCCAACTTCAAGGCGACCAACGAAAAAATGTCTCTACATTCCTCGTCCAGGCAAGTATTGTGAAGAAGGACAATATCAAGATTCATGGTTTCTGA | 552 | 48.19 | MTRGRSILCGTAASELSDYAIVASKFSNYAIAAHICCKGDWNRQFERDARGLASRQGSAMQESCWPRRMKLEDRTGALAENSDPFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQASIVKKDNIKIHGF | 183 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 25494621 | 25506543 | + | BLOR02599 | Blo10g00809 | 66005 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo10g00809 | 183 | Gene3D | - | 67 | 183 | - | - | |
| Blo10g00809 | 183 | TIGRFAM | SUI1_MOF2: translation initiation factor SUI1 | 80 | 183 | IPR005874 | GO:0003743 | |
| Blo10g00809 | 183 | Pfam | Translation initiation factor SUI1 | 98 | 170 | IPR001950 | GO:0003743|GO:0006413 | |
| Blo10g00809 | 183 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 81 | 183 | - | - | |
| Blo10g00809 | 183 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 101 | 171 | IPR001950 | GO:0003743|GO:0006413 | |
| Blo10g00809 | 183 | CDD | eIF1_SUI1 | 99 | 182 | IPR005874 | GO:0003743 | |
| Blo10g00809 | 183 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 81 | 183 | - | - | |
| Blo10g00809 | 183 | SUPERFAMILY | eIF1-like | 82 | 183 | IPR036877 | GO:0003743|GO:0006413 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo03g00556 | Blo-Chr3:21901163 | Blo10g00809 | Blo-Chr10:25494621 | 4.64E-55 | dispersed | |
| Blo10g00809 | Blo-Chr10:25494621 | Blo13g00396 | Blo-Chr13:23314273 | 6.25E-55 | dispersed | |
| Blo10g00809 | Blo-Chr10:25494621 | Blo07g00918 | Blo-Chr7:28184347 | 3.58E-56 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo10g00809 | K03113 | - | tcc:18593645 | 201.83 |