Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00822 ATGATCCAATGGATGAAGCGATTGGGAGCTTCATTTGGGGTTTCGTTTCTCTGGCTTATTTGCTTGATTTACTTCACCCAGGGATTTAGATCCTTTGTGTGGACTGCAGTTTCATATCAGCTAAAAGATAAGCTTAGGCTGTCACCCTCAGAATCACAGTTTGTGTTTTCTGTTGCATTTTTCCCTTGGAATATAAAGCCAATCTATGGAATTTTCTCTGATTGTATTTCAATCAGAGGGAGAAAAAGGATTCCATACTTGGTGATCGCAACGTTACTTTCTCTTGTGCCATGGCTTTTTCTAAGCCTAAACTCAACTTTAAGTTCCAGATGGTATCTTATGATTTTATTGACACTGCAAAATGTGGGGTCAGCTATGGCTGATGTGGTGATTGATGCCATGATTGCTGAGGCCGTGAGACTTGAGGGGTCTTCATTTGCTGGAGATCTGCAGTCAATATCTTGGTTGGCAATGGCTTTTGGTGGCATAAGCGGAAGTTTATTCGGTGGATTTGCATTAACCAAGTTAGAGATAAACAGGATTTTTCTTATTTTTACTATACTACCAGCCATGCAGTTATTATCGTGTGGTATGGTTGATGAAAAGCCAGTAAACAGCAGAAAGAATTCGGAGCTTTCTCATACAATAAGTTTCTCAGCGGTCAATGGTGGCAGTAAAGATCTAGACAGTGATAGTTTTTCAAGAAGAAAATCCAAAAGTACCTCAAGGGGAAAGAAGAGGCCAAAGAACAAAAAGAAAGCATTTATTACTGATAAGTCACAGCAATCTAATAATGAAATGTCCTTGATATTACAGTGGTTTCATTCTCTAAAATCAGCCTCTTACAGTTTGATCCGTGCTTTTACGAAACCAATGATATTAAGACCAATGACATGGTTTTTCCTTGCACATGTAACTGTTCCAAATCTATCCACGGCCATTTTTTACTACCAAACAGAGGTCTTACATTTGGAAGCCTCTTTTCTTGGGACTGCACGAGTCGTAGGATGGTTGGGTCTAATGTTGGGAACTTTCATTTATAATCGCTGCTTTAAGACTATGAAGCTAAGAAGAATACTCATGTGGGCTCAAATTGGTTTATCTCTTCTGAGTCTCCTTGATGTGGTATTGGTTTCTCGCTTGAATGTTGACATTGGGATATCTGATAGAACGATGGTGCTCTTCGGTTCAGCTCTTGCGGATGCAATCAATCAACTCAAGTTCATGCCATTCCTGATCTTATCAGGGCAGCTCTGCCCACCCGGAATCGAAGGAACTCTCTTCGCTCTTTTCATGTCGATTAACAACTTAGGCTCGACAATTGGATCGTTCATGGGTGCTGGCCTTGCATCTGCTCTGAACATCTCTTCGGCTTCTTTCGACAAACTTCTTACTGGAATCTCCATTCAAGTAATCTGCTCTTTCATTCCTGTGGCCTTCCTCTTTTTAATACCAAAGGAAGCTACTGGTGCATCAGCATAG 1482 40.69 MIQWMKRLGASFGVSFLWLICLIYFTQGFRSFVWTAVSYQLKDKLRLSPSESQFVFSVAFFPWNIKPIYGIFSDCISIRGRKRIPYLVIATLLSLVPWLFLSLNSTLSSRWYLMILLTLQNVGSAMADVVIDAMIAEAVRLEGSSFAGDLQSISWLAMAFGGISGSLFGGFALTKLEINRIFLIFTILPAMQLLSCGMVDEKPVNSRKNSELSHTISFSAVNGGSKDLDSDSFSRRKSKSTSRGKKRPKNKKKAFITDKSQQSNNEMSLILQWFHSLKSASYSLIRAFTKPMILRPMTWFFLAHVTVPNLSTAIFYYQTEVLHLEASFLGTARVVGWLGLMLGTFIYNRCFKTMKLRRILMWAQIGLSLLSLLDVVLVSRLNVDIGISDRTMVLFGSALADAINQLKFMPFLILSGQLCPPGIEGTLFALFMSINNLGSTIGSFMGAGLASALNISSASFDKLLTGISIQVICSFIPVAFLFLIPKEATGASA 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26056897 26061210 + BLOR02612 Blo10g00822 66018

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00822 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 4-RELATED 1 492 - -
Blo10g00822 493 Pfam BT1 family 27 487 IPR039309 -
Blo10g00822 493 Gene3D MFS general substrate transporter like domains 15 484 IPR036259 -
Blo10g00822 493 MobiDBLite consensus disorder prediction 224 260 - -
Blo10g00822 493 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 1 492 IPR039309 -
Blo10g00822 493 TIGRFAM fbt: folate/biopterin transporter 19 486 IPR004324 GO:0016021
Blo10g00822 493 CDD MFS_FBT 18 482 - -
Blo10g00822 493 MobiDBLite consensus disorder prediction 239 253 - -
Blo10g00822 493 SUPERFAMILY MFS general substrate transporter 17 487 IPR036259 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00822 - - - pvy:116118284 675.626
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00206 Blo-Chr9:9191793 Blo10g00822 Blo-Chr10:26056897 7.71E-55 dispersed
Blo10g00822 Blo-Chr10:26056897 Blo18g00007 Blo-Chr18:92209 5.28E-20 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g484 . . . . Bpe09g00181 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo10g00822 . Bda12g00902 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016664 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 7
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo10g00822 Blo_Chr10 FPKM 8.848797 13.834215 16.61879 14.965329 23.194233 19.265831 14.033912 15.753409 15.447105 16.483677