Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00842 ATGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCAGGACCAAATTCTGCAACTTGCCTCTCCAAACCCATTTCAGTCTTTTGCTTCTTGGCCTTTCTCTCCGCCTTGGTCGACTCGCATCCTTGCAGCGAGGCATTCCATACCTTCATCGAAAAGAAAAACATAACGCAGCACTGCCAGAAACTCGACACTCTAGGAGCCGAAATAGGATGGAACTACCAAAACGTGAGCTCCGAAAGTCAGATCGTCGACGTCATTTTCGCCGCCCCTATGAAAGCAGAGAAGGGCTGGCTAGCCTGGGGAGTAAACCCAGTAAGTGATCAAATGATCGGAACCAACGCCATAGTCGGAATCAAATACGCAAACGGAAGTACAAGCTGCGACACTTACAACTTAACCAGAGACACCAAGCTCGGCTGCGAAATATCGCCGACGCCGATCAGTGAAGTGAAGAACAAGAGTTTCCAGTTCGAGAGTTCGATCGGTTACTTCGCCATTTCCGCAAAACTAAAGGTGTCTACCGAAACTTTCAATGTTTCGGCGATGAATATGGTGTGGCAAATCGGATTCGGAATTGAGGGAGATAGGCCGAAATATCACCCCGTGACTCTGCAGAACGTGGACAGTACAGACATTATCAACTTGGAGACAGGAGACAGTTACGTCTTTAGACATAAGAGGAATCACCTCATAAGGGTGCATGGGATTCTTAACATTGTAGGGTGGGGTGTCCTCCTGCCTGTTGGTGCAATAACAGCAAGGTATTTTAGGCCTAAACCCATAAAAAGCAGGAGTTGGCTAGCAATTCATGTTTTGTGCCAAATAGTCGGTACTATTCTCGGTACCATTGGTTGGGCCATCGGGATTTGGCTCGGATCTGTCTCGAGAAATTACTTCTTTCGAATCCATCGTATTCTCGGCATCGTCATCTTTACAGTGGCGGCAACTCAATTGTTGTCTCTGCGGTGGAAGCCGAAGAAATTTGACGAGTACAAGAGATATTGGAAGATATATCATCATTTCATGGGCTATGCCTTGCTTGCTCTGATTGCAACCAACATATTTCGAGGAATAAACATTCTAAGGCCTCACCATATGCGGTGGAGATGGGCATACATTGGAATTTTGGTGGGTCTGTCTTCAGTTGCTCTTGCAATGGAAATTTTCCATTGCTTCGCCTTCTTGTATGAAAAACAAGAGAAGAGGAGCCCTGCAAGGAATGACAGCGATAGCGAATCATCAGTTGTTGTAGGCGGGCAGACGGATAGGGATGCTGAAACTGACGCATCAGTTACTGTAGCCGTTTGA 1308 46.48 MASSSSSSSSSAGPNSATCLSKPISVFCFLAFLSALVDSHPCSEAFHTFIEKKNITQHCQKLDTLGAEIGWNYQNVSSESQIVDVIFAAPMKAEKGWLAWGVNPVSDQMIGTNAIVGIKYANGSTSCDTYNLTRDTKLGCEISPTPISEVKNKSFQFESSIGYFAISAKLKVSTETFNVSAMNMVWQIGFGIEGDRPKYHPVTLQNVDSTDIINLETGDSYVFRHKRNHLIRVHGILNIVGWGVLLPVGAITARYFRPKPIKSRSWLAIHVLCQIVGTILGTIGWAIGIWLGSVSRNYFFRIHRILGIVIFTVAATQLLSLRWKPKKFDEYKRYWKIYHHFMGYALLALIATNIFRGINILRPHHMRWRWAYIGILVGLSSVALAMEIFHCFAFLYEKQEKRSPARNDSDSESSVVVGGQTDRDAETDASVTVAV 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26884707 26887560 + BLOR02632 Blo10g00842 66038

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00842 435 MobiDBLite consensus disorder prediction 404 435 - -
Blo10g00842 435 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 25 412 - -
Blo10g00842 435 CDD Cyt_b561_FRRS1_like 209 388 - -
Blo10g00842 435 Pfam Protein of unknown function (DUF568) 109 215 IPR045265 -
Blo10g00842 435 PIRSF UCP037471 18 420 IPR017214 -
Blo10g00842 435 ProSiteProfiles DOMON domain profile. 65 189 IPR005018 -
Blo10g00842 435 SMART 561_7 233 358 IPR006593 -
Blo10g00842 435 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 25 412 - -
Blo10g00842 435 ProSiteProfiles Cytochrome b561 domain profile. 196 395 IPR006593 -
Blo10g00842 435 Gene3D - 212 402 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00842 - - - zju:107432698 377.867
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00508 Blo-Chr6:27117937 Blo10g00842 Blo-Chr10:26884707 1.58E-60 dispersed
Blo10g00842 Blo-Chr10:26884707 Blo17g00007 Blo-Chr17:50531 2.86E-07 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g546 . . Bda07g00372 . Bpe09g00163 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0052 Cone9ag0062 . . . . . . . Blo10g00842 . . Bpe11g00557 . . Bma14g00329 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011685 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo10g00842 Blo_Chr10 FPKM 3.286077 4.587813 10.368816 10.660895 5.53068 6.221299 5.435194 4.885117 4.591114 4.727386