Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00844 ATGGAATCGGATAGAACTGAAGCTTCTAGAATTCTTCAAGAAATCGAGTCATTGAAGTCATCTAAGCTCGATATCGAACGTCGGATTACGGCTCTCGAAGCACAGCTCCGGGAGTTGAAAGTTCAGCCTGAAAACGATGTTGCGAACGGCTCTTCTACTCCGGTTTCCACGTTCGAATCCGACTTGCCTCATAGATTGCCGCCTCAAATGATTTACAGATACAGTCGACACCTCTTGCTTCCCTCTTTCGGCGTCCAAGCTCAATCGAAGCTGTTGAACTCTTCGATATTAGTAATTGGGGCGGGAGGACTAGGTTCGCCAGCTCTGTTATACCTTGCAGCATGTGGTGTCGGTCGCTTGGGCATTGTTGATCATGATGTGGTTGAGCTCAATAACATGCATCGCCAGATTATCCACACTGAAGCTTATATTGGTCAGTCAAAAGTGAAATCTGCTGCTGCTACTTGCCACTCTATCAACTCCACAGTTCAGATTGTGGAACATGTTGAAGCTCTTCGGACATCAAATGCTTTGGAGATTATGAGCAAATATGATATAATAGTAGATGCTACAGATAATGCTCCAAGCCGGTACATGATTAGTGATTGCTGTGTGGTGTTAGGAAAGCCTCTCGTCTCTGGTGCAGCCTTGGGATTGGAGGGACAGCTCACAGTATACAATTATAATGGTGGCCCGTGTTATCGATGTTTATTTCCCACTCCACCACCAACAACAGCATGTCAAAGATGTGCAGACAGTGGTGTCTTAGGTGTAGTTCCTGGCATCATTGGCTGTCTCCAAGCCCTGGAAGCTATTAAAATAGCAAGTGAAGTTGGTGAACCACTTACAGAAAGGATGCTTCTGCTTGATGCATTGTCGGCTAGGATCCGTATTGTCAAGATTCGAGGCAAGTCATTACAATGCGAGGTTTGTGGAGAAAATGCTCAATTCACTGCACAGAAATTCAGAGAATTTGATTATGAGAAGTTTACTCAGTCCCCTCTATCTACGACTCCACCCAAGTTAAAGCTGCTTGAGGCGGATTCAAGAATAAGCAGCAAAGAGTACAAGGAGAGAATCATTAATGGCGAGGCTCATGTTTTGGTGGACGTTCGACCAAATCACCACTTCAAGATCGTTTCTCTGCCAAACTCCATAAACATCCCTCTCTCAAGCTTGGAGGCTCGATTATCAGAAATATCGTCGGCTTTGAAGGAAGAGGAAGAGCGGCACTGCAGTACAATTTCCGGTAGTCATGCTCAATTATACGTGGTTTGTAGGCGGGGCAATGATTCTCAGAGGGCTGTTGAGTACCTCCACAAGAAGGGGTTTGATTCAGCCAAGGATATAGTTGGTGGTTTGGAAGGCTGGTCCCGAGAGGTTGATCCAAGCTTCCCTACGTAT 1404 45.73 MESDRTEASRILQEIESLKSSKLDIERRITALEAQLRELKVQPENDVANGSSTPVSTFESDLPHRLPPQMIYRYSRHLLLPSFGVQAQSKLLNSSILVIGAGGLGSPALLYLAACGVGRLGIVDHDVVELNNMHRQIIHTEAYIGQSKVKSAAATCHSINSTVQIVEHVEALRTSNALEIMSKYDIIVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALEAIKIASEVGEPLTERMLLLDALSARIRIVKIRGKSLQCEVCGENAQFTAQKFREFDYEKFTQSPLSTTPPKLKLLEADSRISSKEYKERIINGEAHVLVDVRPNHHFKIVSLPNSINIPLSSLEARLSEISSALKEEEERHCSTISGSHAQLYVVCRRGNDSQRAVEYLHKKGFDSAKDIVGGLEGWSREVDPSFPTY 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 26900812 26904095 - BLOR02634 Blo10g00844 66040

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00844 468 Pfam ThiF family 74 309 IPR000594 -
Blo10g00844 468 Coils Coil 390 410 - -
Blo10g00844 468 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 32 468 IPR028885 GO:0002143|GO:0004792|GO:0005829
Blo10g00844 468 SMART rhod_4 352 463 IPR001763 -
Blo10g00844 468 Gene3D - 69 318 - -
Blo10g00844 468 Coils Coil 15 42 - -
Blo10g00844 468 Pfam Rhodanese-like domain 354 459 IPR001763 -
Blo10g00844 468 ProSiteProfiles Rhodanese domain profile. 362 466 IPR001763 -
Blo10g00844 468 CDD ThiF_MoeB_HesA_family 73 301 - -
Blo10g00844 468 PANTHER ADENYLYLTRANSFERASE AND SULFURTRANSFERASE MOCS3 5 453 - -
Blo10g00844 468 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 5 453 IPR045886 -
Blo10g00844 468 Gene3D - 349 468 IPR036873 -
Blo10g00844 468 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 71 435 IPR035985 GO:0008641
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00844 K11996 MOCS3, UBA4; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11] - zju:107432745 732.635
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00844 Blo-Chr10:26900812 Blo15g00710 Blo-Chr15:22998955 7.66E-17 dispersed
Blo16g00608 Blo-Chr16:24609099 Blo10g00844 Blo-Chr10:26900812 1.73E-11 dispersed
Blo10g00844 Blo-Chr10:26900812 Blo02g00812 Blo-Chr2:28502196 1.67E-17 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g557 . . . . Bpe09g00160 . . Bma13g01072 Cmo16g00940 . . . . . . . . . . . . . . . Cla10g00489 Cam10g0478 Cec10g0498 Cco10g0484 Clacu10g0497 Cmu10g1324 Cre10g0730 . . . Cone15ag1182 . . . Cme06g02850 . Blo10g00844 . Bda12g00925 . . . . . . . . Cma16g00905 . Car16g00880 Cpe14g00720 . . . . . . . . . . . . . . . Lsi05g00576 . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo04g00468 . 447 753 Sulfurtransferasese/Rhodanese AT1G79230 77.9 3.8e-146 514.6
Blo04g00468 . 435 699 Sulfurtransferasese/Rhodanese AT1G16460 73.6 4.6e-113 404.4
Blo04g00810 . 34 307 Sulfurtransferasese/Rhodanese AT5G23060 61.2 1.6e-85 313.2
Blo16g00465 . 1 443 Sulfurtransferasese/Rhodanese AT4G01050 52.5 9.6e-120 427.6
Blo18g00643 . 9 613 Sulfurtransferasese/Rhodanese AT1G09280 63.2 2.1e-219 758.8
Blo13g00668 . 91 460 Sulfurtransferasese/Rhodanese AT2G40760 73.3 6.6e-155 544.3
Blo13g00095 . 87 432 Sulfurtransferasese/Rhodanese AT1G17850 65.4 1.9e-135 479.6
Blo12g00602 . 108 241 Sulfurtransferasese/Rhodanese AT2G42220 76.1 3.1e-57 218.8
Blo09g00271 . 40 221 Sulfurtransferasese/Rhodanese AT3G08920 61.0 1.4e-64 243.0
Blo15g00245 BCT 93 303 Sulfurtransferasese/Rhodanese AT4G24750 73.0 9.9e-93 337.0
Blo08g00130 . 401 616 Sulfurtransferasese/Rhodanese AT5G19370 65.1 2.6e-80 295.8
Blo10g00844 . 117 468 Sulfurtransferasese/Rhodanese AT5G55130 73.9 6.5e-155 543.9
Blo15g00078 . 28 190 Sulfurtransferasese/Rhodanese AT4G27700 81.0 1.2e-74 276.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009966 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 0 1 1 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo10g00844 Blo_Chr10 FPKM 0.989905 0.977168 0.523299 0.362637 24.426926 20.257132 23.28096 3.632932 3.164888 2.869117