Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00853 ATGGCCACGCTTCAACTACCTAATCCCAAGGGATTAATTTCTACTTCTTCAATTTCCTCTTGTTTCCATCACAAGAGGTCGTCTTTTTCCTTCACCATTTCCAGAGAATGTCCCCCTTCGCAAGGTAGACAGAGGGGGTTGTCTAGAAGGCACAGTTTGATCGCTGCGAGCTGTTCTTTTTCTTCTATGGACTCTGCCAAGATTAAGGTGGTGGGAGTTGGCGGTGGTGGGAATAATGCCGTCAATCGAATGATTCGCAGTGGTTTACAGGGTGTTGATTTCTATGCCATAAACACAGATGCCCAAGCGCTAGTTCAGTCTTCTGCCGAGCATCCATTACAAATTGGAGAGCTTTTGACTCGCGGTTTAGTGACCTATCCAATTCCTGGATTTATGGTGGGCATTGATGCATTGGAGGCTATTGAGAAGTTGCAGAAAAATGTTGATACGCTTATAGTAATTCCTAATGATCGCTTGCTTGACATCGCCGATGAGCAGACTCCCCTACAGGATGCTTTCCTTCTCGCTGATGATGTTCTACGTCAAGGAGTTCAAGGAATTTCAGACATCATCACGATCCCAGGACTGGTCAATGTGGACTTTGCCGATGTAAAGGCAGTCATGAAAGACTCTGGAACTGCGATGCTCGGAGTAGGAGTTTCCTCTAGCAAGAATCGGGCAGAAGAAGCAGCTGAGCAAGCGACCTTGGCTCCCTTGCTTGGATCATCTATTCAATCAGCTACTGGAGTAGTATATAATATTACTGGAGGAAAAGATATAACCCTGCAGGAAGTTAACAGGGTTTCTCAGGTCGTGACCAGTTTAGCTGATCCTTCGGCAAACATAATCTTTGGGGCGGTTGTGGATGATCGATATAATGGTGAGCTTCACGTTACAATAATTGCGACGGGGTTTTCGCAGTCGTTCCAGAAGAATCTGTTGACAGACCCAAGGGCTGCAAAGAAGCTGGTGGACAAAGTAGAGAGCAAGGATGTAACTCTCCCATACAACCCCTTAAACTCTCCTACTGTTGCAACCAAATCCAGCCCAAGAAGGCTCTTCTTTTAA 1068 45.97 MATLQLPNPKGLISTSSISSCFHHKRSSFSFTISRECPPSQGRQRGLSRRHSLIAASCSFSSMDSAKIKVVGVGGGGNNAVNRMIRSGLQGVDFYAINTDAQALVQSSAEHPLQIGELLTRGLVTYPIPGFMVGIDALEAIEKLQKNVDTLIVIPNDRLLDIADEQTPLQDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLLGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGELHVTIIATGFSQSFQKNLLTDPRAAKKLVDKVESKDVTLPYNPLNSPTVATKSSPRRLFF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27015561 27018782 + BLOR02643 Blo10g00853 66049

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00853 355 PRINTS Cell division protein FtsZ signature 66 86 IPR003008 GO:0005525
Blo10g00853 355 PRINTS Cell division protein FtsZ signature 202 223 IPR003008 GO:0005525
Blo10g00853 355 Pfam FtsZ family, C-terminal domain 212 305 IPR024757 -
Blo10g00853 355 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 125 IPR045061 GO:0003924|GO:0005525
Blo10g00853 355 SUPERFAMILY Tubulin nucleotide-binding domain-like 66 198 IPR036525 -
Blo10g00853 355 CDD FtsZ_type1 83 304 IPR000158 GO:0003924|GO:0005525
Blo10g00853 355 Gene3D - 213 318 IPR037103 -
Blo10g00853 355 PANTHER CELL DIVISION PROTEIN FTSZ HOMOLOG 1, CHLOROPLASTIC 1 125 - -
Blo10g00853 355 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 135 355 IPR045061 GO:0003924|GO:0005525
Blo10g00853 355 PANTHER CELL DIVISION PROTEIN FTSZ HOMOLOG 1, CHLOROPLASTIC 135 355 - -
Blo10g00853 355 SMART Tubulin_4 67 195 IPR003008 GO:0005525
Blo10g00853 355 Gene3D Tubulin/FtsZ, GTPase domain 58 129 IPR036525 -
Blo10g00853 355 SUPERFAMILY Tubulin C-terminal domain-like 197 313 IPR008280 -
Blo10g00853 355 Gene3D Tubulin/FtsZ, GTPase domain 132 212 IPR036525 -
Blo10g00853 355 SMART Tubulin_C_4 197 314 IPR018316 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00853 K03531 ftsZ; cell division protein FtsZ - jre:108994121 394.43
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo07g00880 Blo10g00853 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01337 Blo-Chr7:33561566 Blo10g00853 Blo-Chr10:27015561 9.17E-07 dispersed
Blo09g00498 Blo-Chr9:16164048 Blo10g00853 Blo-Chr10:27015561 7.46E-08 dispersed
Blo10g00853 Blo-Chr10:27015561 Blo01g00128 Blo-Chr1:1742806 1.25E-11 dispersed
Blo10g00853 Blo-Chr10:27015561 Blo07g00880 Blo-Chr7:27540022 7.54E-50 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g585 . . . . . . Bma10g00581 Bma13g01095 . Cmo06g00884 . . . . . . . . . . . . . . Cla10g00460 Cam10g0446 Cec10g0469 Cco10g0457 Clacu10g0467 Cmu10g1296 Cre10g0701 Cone6ag0040 Cone9ag0046 . . . Csa03g00458 . Cme06g02820 Blo07g00880 Blo10g00853 . Bda12g00939 . . . . . . . . . . . . . Bhi11g00549 . . . . Mch10g1390 . . . . . . . . Lsi05g00545 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006787 2 1 2 2 2 1 2 1 1 1 1 1 1 1 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo10g00853 Blo_Chr10 FPKM 1.44382 1.264648 0.0 0.0 0.978049 0.0 0.0 0.0 0.0 0.0