Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00862 ATGCATGAGCCTGAGTCGCATCTGTGGCCTCCGATCGGCAGTTATGATCATAGCTCAAGCTCTGAAACCCATCTAACAGTTCAGGACTGTGAAGCATACTGCACCCTCGATTCATTCTCAGGATCAAGCAATTTTACTGATCAAACTTCTCATTTTACTATGAACGAAAACAAGATTTCTCAGAAAGACTCTCATTCGCTCGACAACACTTCTGGCTCACCCGTCAGCAAATCCTGCTTATCGGATGATTCTGATGATCTGAGACATAAAATACTAGAATTAGAGACAGCTATGCTTGGACCTGATTCAAATATGCATGACAACTACAACTTCAGAAACCCGTATGAACTGCACCAAACCAAGGTAGAATCCGAGAAGTGGAATCAAGTGATGGAGACAGTCTCGAAAAGGGAATTGAAAGGTATCCTTTGTGCATGTGCGAAAGCCATAGAAGAAGGTAATATGTTTACTGCAGAATGGTTGGTATCGGAATTACGCCAGATGGTATCAGTTTCGGGCGAACCAATCGAACGCATTGGAGCATACACATTAGAAGCACTAATAGCAAGATTGGCCTCTTCAGGTAGTTCTATCTATAAAGCTCTAAGATGTAAAGAGCCTCTCAGTAACGAACTTCTATCGTACATGCACATACTTTACGAAGCCTGCCCATACTTCAAATTCGGATATATGTCGGCAAATGGGGCAATTGCTGAAGCTATCAAGGATGAAAAAAGAGTCCACATAATTGACTTTCAGATCTCACAAGGCACCCAATGGCTGTCACTAATCCAGGCCCTTTCTGCACGTCCTGGAGGACCCCCCATGATTAGAATAACAGGCATAGATGACCCAACATCAGCTCACGCCAGGGGAGGTGGGCTTGAAATTGTTGGAAAGCGGTTGTATGCCTTTGCAAAGTCTTGTAAAGTACCCTTAGAATTTCATGCTGTTGAAATTCTAGCCTCTGAAGTTCAACTTGAAGATCTAAGAATTCAATCGGGCGAGGCCATTGCTGTGAATTTTGCCCTCATTCTGCATCATATACCTGACGAGAGCGTCACAATTCACAATCACAGGGATAGGATTGTGAGATTGGCAAAGAGCTTATCCCCTAAGGTGGTGACTCTAGTTGAGCAAGAGTGTAACACTAACAAAACCTCTTTTTTTCCCCGCTTCCTCGAGACGTTGAAATATTATTCGGCAATTTTCGAGTCTATTGACGTGTTTTTGCCAAGAGAAAACTGGGAGCGGATCAACGTTGAACAACACTGTCTGGCAAGAGAAATTGTTAATATTATCGCATGCGAGGGGGTCGAAAGAGTAGAACGGCACGAACTTCTCGAAAAGTGGAAATCAAGGTTTGTTATGGCTGGCTTTAAACCTTACCCTTTAAGTGCCTATGTCAATTCTACCATAAGGACTCTTCTGCAGAACTACTGTGAGAAGTATACACTTGAAGAAAGAGATGGGGCTCTATATCTTGGCTGGATGAATCAAATTTTGATAACTTCTTGTGCTTGGGTGTGA 1530 43.01 MHEPESHLWPPIGSYDHSSSSETHLTVQDCEAYCTLDSFSGSSNFTDQTSHFTMNENKISQKDSHSLDNTSGSPVSKSCLSDDSDDLRHKILELETAMLGPDSNMHDNYNFRNPYELHQTKVESEKWNQVMETVSKRELKGILCACAKAIEEGNMFTAEWLVSELRQMVSVSGEPIERIGAYTLEALIARLASSGSSIYKALRCKEPLSNELLSYMHILYEACPYFKFGYMSANGAIAEAIKDEKRVHIIDFQISQGTQWLSLIQALSARPGGPPMIRITGIDDPTSAHARGGGLEIVGKRLYAFAKSCKVPLEFHAVEILASEVQLEDLRIQSGEAIAVNFALILHHIPDESVTIHNHRDRIVRLAKSLSPKVVTLVEQECNTNKTSFFPRFLETLKYYSAIFESIDVFLPRENWERINVEQHCLAREIVNIIACEGVERVERHELLEKWKSRFVMAGFKPYPLSAYVNSTIRTLLQNYCEKYTLEERDGALYLGWMNQILITSCAWV 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27163983 27165512 - BLOR02652 Blo10g00862 66058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00862 509 MobiDBLite consensus disorder prediction 60 81 - -
Blo10g00862 509 MobiDBLite consensus disorder prediction 1 20 - -
Blo10g00862 509 ProSiteProfiles GRAS family profile. 130 509 IPR005202 -
Blo10g00862 509 PANTHER GIBBERELLIN-RESPONSIVE PROTEIN, PUTATIVE-RELATED 7 508 - -
Blo10g00862 509 Pfam GRAS domain family 141 508 IPR005202 -
Blo10g00862 509 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 508 IPR005202 -
Blo10g00862 509 MobiDBLite consensus disorder prediction 60 80 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00589 Blo-Chr3:23047572 Blo10g00862 Blo-Chr10:27163983 7.60E-175 dispersed
Blo04g00113 Blo-Chr4:951849 Blo10g00862 Blo-Chr10:27163983 3.92E-69 dispersed
Blo05g00794 Blo-Chr5:29199863 Blo10g00862 Blo-Chr10:27163983 1.01E-61 dispersed
Blo10g00862 Blo-Chr10:27163983 Blo15g00454 Blo-Chr15:6842938 0 dispersed
Blo12g00171 Blo-Chr12:11174103 Blo10g00862 Blo-Chr10:27163983 5.78E-31 dispersed
Blo10g00862 Blo-Chr10:27163983 Blo02g00135 Blo-Chr2:1150119 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12855 PF03514 GRAS 4.80E-133 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00862 - - jre:108985037 697.197