Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00863 ATGGGTGAGCCTGATAATCAGATAGAAGTCGCTGAGATGATAAAAAGTGAAACTAACCCAACAGAGAAAATTTGTGAGATTGTTAATGAGAAGAAAGGGGAAGCAAATGGCGGTGTAACTGAAATGGAAGAAGATCCAAAAGCTGATCCCAAGGTTGACAATTTAAAGATGGATGAAGACGAGACAAGCAAACAAATAATAGATGATGAAGGAGAGAAACCAATTGTAGAAACAAAGGAAGAGAAAGAAGAAGCCATCGTTGTAGAAGAGAAAGAAGAAGCCATCGTTGTAGAAGAGAAAGAGAAGGATGAAATTGAAGTTGAAACTGAGGAAAAGAATGTAGAGGCTGAAATTGAAACTAAGGAACAAAATGAGGATTGTAGAGTTGAATCTAATGAAAAAAATGAGGATTCTGGAGTGGAAACTAACGAAAAAAATGAGGATTCTGGAGTTGAAACTAAAGAAAAAAATGAGGATTCTGGCGTCAAACCCAAGGAAAAGGATGAGGAATCTAGAATTGAATCTATGAAAAATGAGGATTCTAAAGTCAAAACAAAGGAGGAAAAAGATCCAATCGTGCAGCTAATGGAAGAGGATACACATGATAACGGAATAGAAGAGATAGAAGAGTTGAAGCAGGTTGATGAGGATAAGGAAGAAGAAGATGAAGAAGAAGAAGAAGAGATGGAAGACAAGAAGGAAAAAGAGATTGAGGTGGAGAAGGGTTCAAAAAAACGTGGAAGGAGGAAGAGTTCAGAGAAAGGGAGAGAAAAGAAGAATAAATTGGAAGAGAAAGAACCAGAACAAAGGACACCTATGATCGATCGCCCCGTACGAGAAAGAAAATCAGTCGAAAGGCTGGTAGCATCAATTGAAAGAGACAGTGGGAAGGAATTCCATATTCAGAAGGGCCGCGGCACACCTCTTAAGGATATACCCAATGTGGCATTCAAACTATCTAGGAAGAAGAGTGATGATACCTTTAAGCTGCTTCATTCTATTCTCTTTGGTAGGAGAGGAAAGGCATTTCAGGTGAAAAGCAATGTATCTCGGTTTTCTGGTTTTGTTTGGCAGGAAAAAGAGGAAAAGCAAAGGAATAAAGTGAAAGAAAAATTTGATAAATGTACAAAAGAGAAGTTGCTGGAATTTTGTGACGTGCTGGACATCCCAGTTGCAAAAGCTACCACAAGGAAGGAAGACATTGTCACTAAGCTGATTGAGTTTTTGGTTGCTCCTCATCCAACAACGACTGTGCTTCTTGCTGAGTCAAGCAGGGGACAGAAACGTAAAAGAGTAATTAAAAGTAGTTCATCAACTCCTGGAATCAATGATTCAAAACATTCATCAAAGAGTCGAAGAAAGAGCGAAGATACTTCTAAATCTGAGGTAACAAAGGATGTGTCTGATACTGGAGATGAGTCAGAAGAAGAAAAAGAAAGTGATGAAGAAATTGACGAGCAATATCAAAATGGATCACCGGAAAAGCCTGAGGATGATATGCCTGAGGATTCAGAAAGTGAGAAGCAGAATGATCCAACAGATGAATCTGAAGAAGAAAAACCTAAGCGAAGGTCAAAAAGTTCAAGTAGAAAAAAGGAAACTACTGGAAAATCTAGAAGTAAGAAAATTGTGGCTTCTCCGAGATCCAGTCCTCCACCCAAGAGAACAGCAAAGAAACCCTCTAAAAGCTCTACAGTTGATGAGGATGAAATAAGTCATAAGGTATTCTCAAGGAAGAGGAGCAATGAAAAAGTCAAGGGTAGTGCCACAACTCCTAAAACTGCTCCGAAGGAGAAAGTTGGGAGAAAGGGTGGTAAGGGAAAGGACAAGCGGAAAGAAGAGAAATTGAGGTTAACTGACGATGAACTTAGAGATGCAATTTGTGAAATTCTTAAAGAAGTGGACTTCAATACAGCTACTTTCACGGATATTCTGAAGCAGCTTGGTATGTGTTCTTGTTTTGGGGAAAGTTTTGAAAGATTTGCATTTCTAATTTATTGCTTTGTCTTTGCTGGTTATAAAAGATATGATGTCAATGTTAAGTATCCGATGCCGTTTGTTTTGCCCGTTTCAGCTAATCGATACAAAACTGACCTTACCCCAAGAAAGTCATCCATAAAGCTAATGATCCAAGAGGAGCTCACTAAACTAGCAGATGAGGCGGACGACGAAGAAGAAGAAGACGACGAAGAAGCCGGAGGAGGAGGGAAAGACGAAACACAGGCAAAAGGTCAAGAAGTGGAAACTTGA 2250 39.29 MGEPDNQIEVAEMIKSETNPTEKICEIVNEKKGEANGGVTEMEEDPKADPKVDNLKMDEDETSKQIIDDEGEKPIVETKEEKEEAIVVEEKEEAIVVEEKEKDEIEVETEEKNVEAEIETKEQNEDCRVESNEKNEDSGVETNEKNEDSGVETKEKNEDSGVKPKEKDEESRIESMKNEDSKVKTKEEKDPIVQLMEEDTHDNGIEEIEELKQVDEDKEEEDEEEEEEMEDKKEKEIEVEKGSKKRGRRKSSEKGREKKNKLEEKEPEQRTPMIDRPVRERKSVERLVASIERDSGKEFHIQKGRGTPLKDIPNVAFKLSRKKSDDTFKLLHSILFGRRGKAFQVKSNVSRFSGFVWQEKEEKQRNKVKEKFDKCTKEKLLEFCDVLDIPVAKATTRKEDIVTKLIEFLVAPHPTTTVLLAESSRGQKRKRVIKSSSSTPGINDSKHSSKSRRKSEDTSKSEVTKDVSDTGDESEEEKESDEEIDEQYQNGSPEKPEDDMPEDSESEKQNDPTDESEEEKPKRRSKSSSRKKETTGKSRSKKIVASPRSSPPPKRTAKKPSKSSTVDEDEISHKVFSRKRSNEKVKGSATTPKTAPKEKVGRKGGKGKDKRKEEKLRLTDDELRDAICEILKEVDFNTATFTDILKQLGMCSCFGESFERFAFLIYCFVFAGYKRYDVNVKYPMPFVLPVSANRYKTDLTPRKSSIKLMIQEELTKLADEADDEEEEDDEEAGGGGKDETQAKGQEVET 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27329760 27335021 + BLOR02653 Blo10g00863 66059

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00863 749 MobiDBLite consensus disorder prediction 717 734 - -
Blo10g00863 749 Gene3D - 608 653 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 99 282 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 469 487 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 596 615 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 99 208 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 498 512 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 560 586 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 716 749 - -
Blo10g00863 749 PANTHER DEK PROTEIN 176 649 IPR044198 GO:0003677|GO:0006325
Blo10g00863 749 Coils Coil 205 239 - -
Blo10g00863 749 Pfam DEK C terminal domain 619 648 IPR014876 -
Blo10g00863 749 Coils Coil 358 378 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 421 615 - -
Blo10g00863 749 Coils Coil 707 727 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 735 749 - -
Blo10g00863 749 PANTHER DEK PROTEIN 692 730 IPR044198 GO:0003677|GO:0006325
Blo10g00863 749 PANTHER PROTEIN DEK 176 649 - -
Blo10g00863 749 PANTHER PROTEIN DEK 692 730 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 446 468 - -
Blo10g00863 749 Coils Coil 88 124 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 31 78 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 256 282 - -
Blo10g00863 749 MobiDBLite consensus disorder prediction 209 233 - -
Blo10g00863 749 SUPERFAMILY DEK C-terminal domain 615 649 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00863 K17046 DEK; protein DEK - zju:107434063 500.745
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00863 Blo-Chr10:27329760 Blo15g00199 Blo-Chr15:2048079 1.85E-62 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g658 . . . . . . . Bma13g01112 . Cmo06g00688 . . . . . . . . . . . . . . Cla10g00437 Cam10g0436 Cec10g0458 Cco10g0447 Clacu10g0444 Cmu10g1275 Cre10g0691 . . Cone14ag1216 Cone15ag1237 . . . . . Blo10g00863 . Bda12g00961 . . . . . . . . . . . Cpe14g00791 . . . . . . . . . . . . . . . Lsi05g00493 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007248 1 1 1 1 0 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 2 1 1 1 1 1 1 2 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo10g00863 Blo_Chr10 FPKM 11.542753 14.350631 19.97258 19.705856 21.51037 22.770714 22.368835 19.987797 19.787104 22.397057