Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00864 ATGGCGGACTCGGATAACGACTCTTTTGGACACACAGCGACGAACAGCGAGCAATCCCCGAGGGAACAGGACAGACTGTTGCCTATTGCTAACGTGAGCAGGATAATGAAGAAGGCACTACCGGCAAACGCGAAGATTTCCAAGGACGCGAAGGAGATGGTTCAGGAGTGCGTTTCCGAATTCATCAGCTTCATAACCGGCGAGGCGTCGGACAAGTGCCAGAGGGAGAAGAGGAAGACGATCAACGGCGACGATTTACTCTGGGCGATGACGACGCTAGGGTTCGAGGACTACGTGGAGCCTCTAAAGGTATACCTGCAGAGGTTTAGGGAGATAGAAGGAGAGAAAATGGCCGTGGCGCGTGATAAAGACGGCGGTGGGAGAAGCGTGGGTAATGTCGGTAGTAGTGGGACAGGTGGGCCATACGGAAGCGAAATGGAAACGATGATGGCCGGCCAGCATCAACTCCATCAGGGACACGTGTACAACGGAGGTGAATTCCATCAGACGGCTGTGATTAGTGGACAAAGTCGGGGCGGGCCTGGTTATTCCGGTCTCGGATCCAATCCGGGTCGGCCCAGATAG 585 54.87 MADSDNDSFGHTATNSEQSPREQDRLLPIANVSRIMKKALPANAKISKDAKEMVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGEKMAVARDKDGGGRSVGNVGSSGTGGPYGSEMETMMAGQHQLHQGHVYNGGEFHQTAVISGQSRGGPGYSGLGSNPGRPR 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27339437 27340021 + BLOR02654 Blo10g00864 66060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00864 194 SUPERFAMILY Histone-fold 23 132 IPR009072 GO:0046982
Blo10g00864 194 MobiDBLite consensus disorder prediction 172 194 - -
Blo10g00864 194 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 1 168 - -
Blo10g00864 194 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 26 90 IPR003958 -
Blo10g00864 194 MobiDBLite consensus disorder prediction 1 26 - -
Blo10g00864 194 PRINTS CCAAT-binding transcription factor subunit A signature 54 72 - -
Blo10g00864 194 PRINTS CCAAT-binding transcription factor subunit A signature 73 91 - -
Blo10g00864 194 PRINTS CCAAT-binding transcription factor subunit A signature 92 110 - -
Blo10g00864 194 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 168 IPR027113 GO:0001228|GO:0006355|GO:0016602
Blo10g00864 194 MobiDBLite consensus disorder prediction 1 22 - -
Blo10g00864 194 MobiDBLite consensus disorder prediction 122 142 - -
Blo10g00864 194 Gene3D Histone, subunit A 13 160 IPR009072 GO:0046982
Blo10g00864 194 ProSitePatterns NF-YB/HAP3 subunit signature. 57 73 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00141 Blo-Chr2:1233511 Blo10g00864 Blo-Chr10:27339437 5.65E-78 dispersed
Blo03g00464 Blo-Chr3:15511121 Blo10g00864 Blo-Chr10:27339437 4.12E-78 dispersed
Blo04g00812 Blo-Chr4:8423345 Blo10g00864 Blo-Chr10:27339437 6.28E-17 dispersed
Blo04g00929 Blo-Chr4:10990813 Blo10g00864 Blo-Chr10:27339437 3.58E-55 dispersed
Blo05g00317 Blo-Chr5:3591375 Blo10g00864 Blo-Chr10:27339437 1.08E-46 dispersed
Blo10g00864 Blo-Chr10:27339437 Blo13g00735 Blo-Chr13:30178003 2.35E-57 dispersed
Blo10g00864 Blo-Chr10:27339437 Blo15g00440 Blo-Chr15:6493752 3.03E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12856 PF00808 CBFD_NFYB_HMF 3.00E-27 CL0012 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00864 K08065 - qsu:112015911 254.218