Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo10g00891 ATGTTGGGAGGGGAATATAGCGATCAGAATCATCTGCTTAGATCGACGGAGGATCAGATCGAGGATAATGACTTGGAAGCTCGTAATGGAGACGGCAATGTAGATGGAGTTCAAAGCCGCAATTACGGGAGTGGCAGTGGAAGATTAGGCGGAGGCTTTATGGATCTGTTTAAGCATTTGAATAGAGGGAGCTTCTCTGGACGCCGGCACAGCTTCAAGCGTCTTGACGGCAATCGAATAAACGATTCCGCATCTACCGTTGGTAGAGATGTGGATAGTCATCATCGTCACTCTTATAATGATGATTTTCATCTTCGTCTTCATCATGCCCCTACTGTCAACGCCAGTGATGCCGATGCGGACGACATTCTAGACGACACCGCCCCACCAGAATGGGCGTTGCTCCTTATTGGCTGCCTCGTTGGCCTCGCTACAGGTCTATGTGTTGCTGCATTTAACAAAGGGGTGCATGTAATTCATGAATGGGCATGGGCTGGCACTCCAAATGAGGGTGCTGCTTGGCTTCGGTTACAAAGGTTAGCTGATACTTGGCATCGGATTCTTCTAATACCAGTCACTGGAGGTGTCATTGTTGGCATGATGCATGGCTTAGTTGAAATACTCTACGAAATCAAGCAATCCAGTCCTTCTCAAAGGCCAGGATTTGATTTACTTGCTGGAGTCTTTCCCACAGTAAAGGCCATTCAGGCAGCTATCACTTTGGGTACTGGGTGTTCATTGGGCCCTGAAGGACCTAGTGTGGATATTGGAAAATCTTGTGCAAATGGGTTCTATTTAATGATGGAAAACAACAATGAAAGGATAAAAATAGCCTTTGTTGCTGCTGGTGCAGCTGCTGGAATAGCTTCAGGCTTTAATGCAGCTGTTGCTGGTTCCTTCTTTGCTATAGAAACTGTTTTAAGGTCCCAACGAGCTGAAAATTCACCACCATTTACAACTGCAATGATTATTCTTGCTTCTGTTATCTCATCTACCGTTTCAAATGTTTTACTTGGGACACAGTCAGCTTTTACAGTTCCTACATATGATTTGAAGTCTGCCGCAGAATTACCTTTATACCTGATATTGGGCATGCTATGCGGAGTAGTGAGTGTAGTAGTGACTCGGTTAGTCAGTTGGTTTCATAAAGCATTTGACCTTATCAAGAACAGATTTAGCCTCCCTGTTGTTGTCTGTCCTGCTTTAGGCGGTTTAGGAGCTGGAATAATTGCTCTTAAGTATCCAGGAATTCTGTATTGGGGCTTCACAAATGTGGAAGAAATCCTTCATACTGGAAAGAGTGCCTCTGCTCCTGGAATCTGGTTATTAACTCAATTAGCTGCGGCAAAGGTTGTTGCAACTGCTTTGTGCAAGGGTTCTGGACTTGTGGGTGGCCTTTACGCCCCAAGTCTAATGATTGGTGCAGCTGTCGGTGCTGTATTTGGGGGTTCAGCAGCAGAAGTTATCAATTCTGCCATTCCTGGAAATGCAGCTGTTGCACAGCCACAAGCATATGCACTGGTTGGGATGGCTGCTACACTTGCTTCAGTTTGTTCAGTTCCCTTGACGTCGGTTCTTCTTCTGTTTGAGCTGACAAAGGATTACAGGATTCTGCTTCCTCTCATGGGAGCTGTTGGATTAGCCATATGGGTTCCTTCAGTGACAAGGCAAGGCAAGGATATTGAAGCCCCTGAAAGTCATGGGTCTTCTAGAGGCTCTTCTTCCCTTTCTCCTTCTGAACGTAATATTGAAATTATCAGGAGACGGAATGATGCAAGCAATAATTTGGAACTCTCAACTATTGAAAATGTATCACTTGTTTCTCAGGCAATGTCAAAGAACTTTCTGAAGATTTCATTATCAACGAGCTTAAAAGATGCAATCAAATATATGAATGAAAGTCAACAGAACTGTGCTTTAGTGGTGGATGATGGAGATTTTCTTGAGGGAATATTAACAAATGGTGACCTTAGACGGTTTCTGTCTAAAGTGTCTGGCGGAGCTTCTTCCGATGGAGATTCAAGACTGCTGGATGTGGATGGAAGTGTCGTGTCCTCTGTTTGTACTAGGGTAATAAGCTATCGTGGGCGAGAGCGAGGGCTTCTAAGTTGTTACCCAGACACTGATTTGGCAACAGCGAAGGATCTAATGGAGGCTAAGGGAATAAATCAGTTACCAGTGGTAAAGCGCGGAGCACCCAAGAAGCATTGGAAACGAAGAGTTGTTGCTGTTCTCCACTATGATTTAATGCGAAATTGTCTCAGAGATGTCTCCGACCTTGACTGTGGTTTGGAATCGCCGTCGACGGAGCTTGAGCTGCCATCGAGCTGGCTTCGTTCATTAGCCCATTGA 2352 45.07 MLGGEYSDQNHLLRSTEDQIEDNDLEARNGDGNVDGVQSRNYGSGSGRLGGGFMDLFKHLNRGSFSGRRHSFKRLDGNRINDSASTVGRDVDSHHRHSYNDDFHLRLHHAPTVNASDADADDILDDTAPPEWALLLIGCLVGLATGLCVAAFNKGVHVIHEWAWAGTPNEGAAWLRLQRLADTWHRILLIPVTGGVIVGMMHGLVEILYEIKQSSPSQRPGFDLLAGVFPTVKAIQAAITLGTGCSLGPEGPSVDIGKSCANGFYLMMENNNERIKIAFVAAGAAAGIASGFNAAVAGSFFAIETVLRSQRAENSPPFTTAMIILASVISSTVSNVLLGTQSAFTVPTYDLKSAAELPLYLILGMLCGVVSVVVTRLVSWFHKAFDLIKNRFSLPVVVCPALGGLGAGIIALKYPGILYWGFTNVEEILHTGKSASAPGIWLLTQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAAEVINSAIPGNAAVAQPQAYALVGMAATLASVCSVPLTSVLLLFELTKDYRILLPLMGAVGLAIWVPSVTRQGKDIEAPESHGSSRGSSSLSPSERNIEIIRRRNDASNNLELSTIENVSLVSQAMSKNFLKISLSTSLKDAIKYMNESQQNCALVVDDGDFLEGILTNGDLRRFLSKVSGGASSDGDSRLLDVDGSVVSSVCTRVISYRGRERGLLSCYPDTDLATAKDLMEAKGINQLPVVKRGAPKKHWKRRVVAVLHYDLMRNCLRDVSDLDCGLESPSTELELPSSWLRSLAH 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 27891718 27899889 + BLOR02681 Blo10g00891 66087

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo10g00891 783 MobiDBLite consensus disorder prediction 11 29 - -
Blo10g00891 783 CDD CBS_pair_voltage-gated_CLC_euk_bac 611 751 - -
Blo10g00891 783 Gene3D - 590 751 IPR046342 -
Blo10g00891 783 MobiDBLite consensus disorder prediction 1 42 - -
Blo10g00891 783 PANTHER CHLORIDE CHANNEL PROTEIN CLC-F 4 756 - -
Blo10g00891 783 PRINTS Chloride channel signature 233 252 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo10g00891 783 PRINTS Chloride channel signature 285 304 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo10g00891 783 PRINTS Chloride channel signature 503 519 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo10g00891 783 PRINTS Chloride channel signature 521 540 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo10g00891 783 PRINTS Chloride channel signature 462 482 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo10g00891 783 Pfam CBS domain 607 662 IPR000644 -
Blo10g00891 783 Pfam CBS domain 700 731 IPR000644 -
Blo10g00891 783 Pfam Voltage gated chloride channel 229 551 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Blo10g00891 783 PANTHER CHLORIDE CHANNEL PROTEIN CLC-E 4 756 - -
Blo10g00891 783 SUPERFAMILY CBS-domain pair 606 731 IPR046342 -
Blo10g00891 783 SMART cbs_1 614 662 IPR000644 -
Blo10g00891 783 SMART cbs_1 700 755 IPR000644 -
Blo10g00891 783 SUPERFAMILY Clc chloride channel 130 555 IPR014743 -
Blo10g00891 783 Gene3D Clc chloride channel 122 563 - -
Blo10g00891 783 MobiDBLite consensus disorder prediction 560 580 - -
Blo10g00891 783 CDD Voltage_gated_ClC 142 548 - -
Blo10g00891 783 ProSiteProfiles CBS domain profile. 611 669 IPR000644 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo10g00891 - - - csv:101212254 993.801
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo07g00854 Blo10g00891 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00891 Blo-Chr10:27891718 Blo15g00406 Blo-Chr15:5802220 4.63E-113 dispersed
Blo10g00891 Blo-Chr10:27891718 Blo07g00854 Blo-Chr7:26930143 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g793 . . . . Bpe09g00096 . Bma10g00617 Bma13g01145 . . . . . . . . . . . . . . . . Cla10g00375 . . . . . . . . Cone14ag1276 Cone15ag1302 . . . . Blo07g00854 Blo10g00891 . Bda12g00991 . Bpe03g00734 . . Sed08g2869 . . . Cma16g00996 . Car16g00953 . . Bhi11g00403 Tan01g1903 Cmetu06g1959 . Hepe06g1241 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004422 1 1 2 4 2 1 2 1 1 1 3 1 2 1 1 2 1 2 2 1 1 0 1 1 2 1 0 3 1 1 43